Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A14
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    35   0.002
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    33   0.012
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    30   0.062
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    30   0.082
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    27   0.77 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    26   1.3  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   3.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.1  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   4.1  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 27/148 (18%), Positives = 65/148 (43%)
 Frame = +1

Query: 160  AKXANLRAEXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 339
            AK  +L+A+ A+    + ++  ++ E +L ++++   +     ++ E+  +  + E+  L
Sbjct: 769  AKVKDLQAKIADGKGHR-ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEEL 827

Query: 340  NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQL 519
             + I              A    +L E S   DE   A   L+ +    +E+M++   +L
Sbjct: 828  QKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKEL 887

Query: 520  KEARFLAEEADKKYDEVARKLAMVEADL 603
            K      ++  K+ DE+  ++   E ++
Sbjct: 888  KAKYHQRDKLLKQNDELKLEIKKKENEI 915


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 32.7 bits (71), Expect = 0.012
 Identities = 22/109 (20%), Positives = 46/109 (42%)
 Frame = +1

Query: 184  EXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXX 363
            E +     +LQK  +  + +LDQ + ++ Q     + K+ A+   E+E+A +   I    
Sbjct: 789  EHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQ 848

Query: 364  XXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALE 510
                            L  ++++ +E +R R  L   +  ++ R +A E
Sbjct: 849  QARHDLQTNHKVKQQALKRSTESMEERKRTRVALS--AALEQARQEASE 895


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 30.3 bits (65), Expect = 0.062
 Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
 Frame = +1

Query: 181  AEXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVA----ALNRR 348
            AE A   A  ++K     +N          Q+NG+L + +  L+  E+++       N  
Sbjct: 1448 AEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEEREAQIRKDLNLTNEA 1507

Query: 349  IQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLAD-EERMDALENQLKE 525
             +             +     + E S    E    R++  N SL D E R+ A E +L++
Sbjct: 1508 KEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVN-SLDDLERRLSAAEKELED 1566

Query: 526  AR 531
            A+
Sbjct: 1567 AQ 1568


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 29.9 bits (64), Expect = 0.082
 Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 3/151 (1%)
 Frame = +1

Query: 154  QQAKXANLRAEXAEXXARQLQKXXQTIENELDQTQESLMQVNG---KLEEKEKALQNAES 324
            Q+ +  N   E  E  A +L++  + ++ +L + Q++ M+V     K +E    L N + 
Sbjct: 634  QRGQIENSIKELQERCA-ELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDE 692

Query: 325  EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDA 504
            E     R  +               A  + + AS+  D  E+  ++ E R+   E     
Sbjct: 693  EKVKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEERNNDREANFRL 752

Query: 505  LENQLKEARFLAEEADKKYDEVARKLAMVEA 597
            LE+  + A+       K    V +KLA V+A
Sbjct: 753  LEDAYQSAK-------KTLANVEKKLAEVKA 776


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
 Frame = +1

Query: 439 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 570
           + E   +  E  + ADEE  D  E       ++L+EAR +AEE +++  E+
Sbjct: 76  DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 709 PXRLPEISGCYQRHGAPPQAQRFWIRQTRHA 617
           P  + E + C+QR+ A P+A R  IR+   A
Sbjct: 844 PLLIKEDARCHQRYLADPEASRAVIRREERA 874


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
 Frame = -2

Query: 547 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 458
           PP R  W P     GRP    P  H PTT + AP
Sbjct: 90  PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = +1

Query: 412 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 591
           L E  +   E E  R          +E  DAL+ +  E   L +E  K+YDE+       
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374

Query: 592 EADL 603
           E+ L
Sbjct: 375 ESTL 378



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 20/101 (19%), Positives = 39/101 (38%)
 Frame = +1

Query: 235 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKL 414
           E+EL   Q   +    KLE    + +  E ++     R+Q              TA  KL
Sbjct: 491 ESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550

Query: 415 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFL 537
            E +    E  +  + ++ +    +E M A+++   + + L
Sbjct: 551 QENANEERELTQTLRAVQGKL---QESMAAMQSTRSQGKVL 588


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 484 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPR 380
           PP   S  PY+   IHR P       R  + + PR
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPR 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.307    0.119    0.295 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,109
Number of Sequences: 2352
Number of extensions: 10093
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)