Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_A11
(366 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075211-1|AAL68078.1| 437|Drosophila melanogaster AT14778p pro... 38 0.004
AE014134-925|AAF52255.1| 437|Drosophila melanogaster CG6907-PA ... 38 0.004
AF040989-1|AAC38849.1| 1395|Drosophila melanogaster roundabout 1... 31 0.46
AE013599-3446|AAF46887.1| 1395|Drosophila melanogaster CG13521-P... 31 0.46
AE013599-3445|AAM71113.2| 1429|Drosophila melanogaster CG13521-P... 31 0.46
L41342-1|AAA64873.1| 336|Drosophila melanogaster protein ( Dros... 27 7.5
D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein h... 27 7.5
D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein. 27 7.5
BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p pro... 27 7.5
AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB... 27 7.5
AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA... 27 7.5
AY075513-1|AAL68321.1| 216|Drosophila melanogaster RE64176p pro... 27 10.0
AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-P... 27 10.0
AE014134-3244|AAN11077.2| 715|Drosophila melanogaster CG31687-P... 27 10.0
AE014134-3242|AAF53896.3| 657|Drosophila melanogaster CG31688-P... 27 10.0
>AY075211-1|AAL68078.1| 437|Drosophila melanogaster AT14778p
protein.
Length = 437
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 61 MRSFRKFIDISTHINGTKVKNNLPYV--SSGIPSLDHIVGGGIPAGSIFVV 207
M SFRK + I GT+ + V SSG P LD ++GGG+P GSI ++
Sbjct: 1 MTSFRKRT-VQKPIRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLI 50
>AE014134-925|AAF52255.1| 437|Drosophila melanogaster CG6907-PA
protein.
Length = 437
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 61 MRSFRKFIDISTHINGTKVKNNLPYV--SSGIPSLDHIVGGGIPAGSIFVV 207
M SFRK + I GT+ + V SSG P LD ++GGG+P GSI ++
Sbjct: 1 MTSFRKRT-VQKPIRGTRTSPHTAQVITSSGNPYLDVVIGGGLPMGSICLI 50
>AF040989-1|AAC38849.1| 1395|Drosophila melanogaster roundabout 1
protein.
Length = 1395
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 191 PAGIPPPT-IWSKDGIPEDTYGRLFF 117
P GIP PT IW KDG+P D + F
Sbjct: 179 PKGIPEPTLIWIKDGVPLDDLKAMSF 204
>AE013599-3446|AAF46887.1| 1395|Drosophila melanogaster CG13521-PA,
isoform A protein.
Length = 1395
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 191 PAGIPPPT-IWSKDGIPEDTYGRLFF 117
P GIP PT IW KDG+P D + F
Sbjct: 179 PKGIPEPTLIWIKDGVPLDDLKAMSF 204
>AE013599-3445|AAM71113.2| 1429|Drosophila melanogaster CG13521-PB,
isoform B protein.
Length = 1429
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 191 PAGIPPPT-IWSKDGIPEDTYGRLFF 117
P GIP PT IW KDG+P D + F
Sbjct: 213 PKGIPEPTLIWIKDGVPLDDLKAMSF 238
>L41342-1|AAA64873.1| 336|Drosophila melanogaster protein (
Drosophila melanogaster(clone pDmR2210) RAD51 homolog
gene, complete cds. ).
Length = 336
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 KVKNNLPYVSSGIPSLDHIVGGGIPAGSI 198
+++ ++ +S+G LD ++GGGI GSI
Sbjct: 91 QMRADVVQLSTGSKELDKLLGGGIETGSI 119
>D37788-1|BAA07039.1| 336|Drosophila melanogaster RecA protein
homologue protein.
Length = 336
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 KVKNNLPYVSSGIPSLDHIVGGGIPAGSI 198
+++ ++ +S+G LD ++GGGI GSI
Sbjct: 91 QMRADVVQLSTGSKELDKLLGGGIETGSI 119
>D17726-1|BAA04580.1| 336|Drosophila melanogaster Rad51 protein.
Length = 336
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 KVKNNLPYVSSGIPSLDHIVGGGIPAGSI 198
+++ ++ +S+G LD ++GGGI GSI
Sbjct: 91 QMRADVVQLSTGSKELDKLLGGGIETGSI 119
>BT001791-1|AAN71546.1| 284|Drosophila melanogaster RH24133p
protein.
Length = 284
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 KVKNNLPYVSSGIPSLDHIVGGGIPAGSI 198
+++ ++ +S+G LD ++GGGI GSI
Sbjct: 34 QMRADVVQLSTGSKELDKLLGGGIETGSI 62
>AE014297-4533|AAN14213.1| 279|Drosophila melanogaster CG7948-PB,
isoform B protein.
Length = 279
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 KVKNNLPYVSSGIPSLDHIVGGGIPAGSI 198
+++ ++ +S+G LD ++GGGI GSI
Sbjct: 34 QMRADVVQLSTGSKELDKLLGGGIETGSI 62
>AE014297-4532|AAF57005.1| 336|Drosophila melanogaster CG7948-PA,
isoform A protein.
Length = 336
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 112 KVKNNLPYVSSGIPSLDHIVGGGIPAGSI 198
+++ ++ +S+G LD ++GGGI GSI
Sbjct: 91 QMRADVVQLSTGSKELDKLLGGGIETGSI 119
>AY075513-1|AAL68321.1| 216|Drosophila melanogaster RE64176p
protein.
Length = 216
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 221 EIHE--PTTKMLPAGIPPPTIWSKDGIP 144
E+HE P + + AG+PPP + S G P
Sbjct: 100 ELHEMEPPSVICKAGVPPPLVSSHPGHP 127
>AE014296-2436|AAS65009.2| 1656|Drosophila melanogaster CG17839-PB,
isoform B protein.
Length = 1656
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 206 TTKMLPAGIPPPTIWSKDGIPE 141
T LPA + PPT+ D IPE
Sbjct: 1024 TDPALPAFVDPPTVHPADNIPE 1045
>AE014134-3244|AAN11077.2| 715|Drosophila melanogaster CG31687-PA
protein.
Length = 715
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 221 EIHE--PTTKMLPAGIPPPTIWSKDGIP 144
E+HE P + + AG+PPP + S G P
Sbjct: 599 ELHEMEPPSVICKAGVPPPLVSSHPGHP 626
>AE014134-3242|AAF53896.3| 657|Drosophila melanogaster CG31688-PA
protein.
Length = 657
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -2
Query: 221 EIHE--PTTKMLPAGIPPPTIWSKDGIP 144
E+HE P + + AG+PPP + S G P
Sbjct: 541 ELHEMEPPSVICKAGVPPPLVSSHPGHP 568
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,194,634
Number of Sequences: 53049
Number of extensions: 242415
Number of successful extensions: 897
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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