Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A11
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    27   0.092
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.6  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   8.0  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    20   8.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    20   8.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    20   8.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    20   8.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   8.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 26.6 bits (56), Expect = 0.092
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 179 PPPTIWSKDG-IPEDTYGRLFFTFVPF 102
           P P ++  D  +PE T  R ++ FVPF
Sbjct: 455 PNPDVFDPDNFLPEKTANRHYYAFVPF 481


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 179 PPPTIWSKDGIPEDT 135
           PPP +W ++G   +T
Sbjct: 339 PPPLVWRRNGADLET 353


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
          protein.
          Length = 69

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 35 SVKYCLSIKIH 3
          + KYC S+K+H
Sbjct: 53 ATKYCHSLKLH 63


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 228 FKRNSRTYNKNAACRYSSTNYM 163
           +  N+  YN N    Y + NY+
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYI 119


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 228 FKRNSRTYNKNAACRYSSTNYM 163
           +  N+  YN N    Y + NY+
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYI 119


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 228 FKRNSRTYNKNAACRYSSTNYM 163
           +  N+  YN N    Y + NY+
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYI 119


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 228 FKRNSRTYNKNAACRYSSTNYM 163
           +  N+  YN N    Y + NY+
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYI 119


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 182 IPPPTIWSKD 153
           + PP IWS D
Sbjct: 470 LDPPVIWSND 479


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,830
Number of Sequences: 438
Number of extensions: 1895
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)