Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A06
         (324 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF247317-1|AAG24757.1|   87|Homo sapiens immunoglobulin lambda l...    29   4.3  
AY424580-1|AAR03043.1|   91|Homo sapiens immunoglobulin lambda l...    28   7.4  
AF296310-1|AAG47694.1|   84|Homo sapiens immunoglobulin lambda c...    28   7.4  
AF247311-1|AAG24751.1|   82|Homo sapiens immunoglobulin lambda l...    28   7.4  
AF195338-1|AAF20739.1|  106|Homo sapiens immunoglobulin V lambda...    28   7.4  

>AF247317-1|AAG24757.1|   87|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 87

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 187 YYCCFFVGTHSCGI 146
           YYCC + G+++CGI
Sbjct: 74  YYCCSYAGSNTCGI 87


>AY424580-1|AAR03043.1|   91|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 91

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 187 YYCCFFVGTHSCGI 146
           YYCC + G+ +CGI
Sbjct: 78  YYCCSYAGSSTCGI 91


>AF296310-1|AAG47694.1|   84|Homo sapiens immunoglobulin lambda
           chain variable region protein.
          Length = 84

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 187 YYCCFFVGTHSCGI 146
           YYCC + G+ +CGI
Sbjct: 71  YYCCSYAGSSTCGI 84


>AF247311-1|AAG24751.1|   82|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 82

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 187 YYCCFFVGTHSCGI 146
           YYCC + G+ +CGI
Sbjct: 69  YYCCSYAGSSTCGI 82


>AF195338-1|AAF20739.1|  106|Homo sapiens immunoglobulin V lambda/J
           lambda light chain protein.
          Length = 106

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 187 YYCCFFVGTHSCGI 146
           YYCC + G+ +CGI
Sbjct: 88  YYCCSYAGSSTCGI 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,798,449
Number of Sequences: 237096
Number of extensions: 444859
Number of successful extensions: 997
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)