Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A06
         (324 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03414-1|CAA27148.1|  466|Drosophila melanogaster Kr polypeptide...    26   9.7  
AY071280-1|AAL48902.1|  501|Drosophila melanogaster RE30918p pro...    26   9.7  
AE013599-4029|AAF47321.1|  502|Drosophila melanogaster CG3340-PA...    26   9.7  

>X03414-1|CAA27148.1|  466|Drosophila melanogaster Kr polypeptide
           protein.
          Length = 466

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 110 LKTTMFQYQGSDAYNCTHYSKRYYAIDSVTRVLDV 6
           LKT M  + G   Y+C+H  +++  + ++ R L V
Sbjct: 265 LKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV 299


>AY071280-1|AAL48902.1|  501|Drosophila melanogaster RE30918p
           protein.
          Length = 501

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 110 LKTTMFQYQGSDAYNCTHYSKRYYAIDSVTRVLDV 6
           LKT M  + G   Y+C+H  +++  + ++ R L V
Sbjct: 264 LKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV 298


>AE013599-4029|AAF47321.1|  502|Drosophila melanogaster CG3340-PA
           protein.
          Length = 502

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 110 LKTTMFQYQGSDAYNCTHYSKRYYAIDSVTRVLDV 6
           LKT M  + G   Y+C+H  +++  + ++ R L V
Sbjct: 265 LKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,784,947
Number of Sequences: 53049
Number of extensions: 140546
Number of successful extensions: 321
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)