Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A03
         (426 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   1.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   2.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   2.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   6.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.6  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -2

Query: 341 SIWGQEIPP*SSL*WENRTCTACSCKPPMVQGWSSCS--KIHQDYAXPDAEYRTQL-HHI 171
           +I+G  + P  +L +E      C+ + P V G   CS    ++D A    + R +  ++I
Sbjct: 79  AIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYI 138

Query: 170 LSPHI 156
             P +
Sbjct: 139 ADPEV 143


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 YKFYSPIRDYSKEESPAPKY 340
           + FY+P R+  + + PAP Y
Sbjct: 238 FDFYTPKRNPKEADYPAPLY 257


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 281 YKFYSPIRDYSKEESPAPKY 340
           + FY+P R+  + + P+P Y
Sbjct: 246 FDFYTPARNPKEADYPSPLY 265


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 319 GISCPQILNCFSNIDQLYYENFXCIKLNK 405
           G+S  Q+   F N+ + +YE F   +L +
Sbjct: 386 GLSLLQVAQIFKNLLENHYEEFVRYELGE 414


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 217 ITXSQTQSIEHSSTTSYPHTYI 152
           +T +  + IE++STT   HT +
Sbjct: 351 LTNTHKRKIENTSTTFNAHTVL 372


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/19 (31%), Positives = 7/19 (36%)
 Frame = -2

Query: 284 CTACSCKPPMVQGWSSCSK 228
           C  C C+      W  C K
Sbjct: 873 CVTCKCENGKPTCWRECDK 891


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,118
Number of Sequences: 336
Number of extensions: 2089
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)