Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_A03
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone oxidoredu... 73 5e-13
CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein. 73 5e-13
CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein. 73 5e-13
BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase (ubi... 73 5e-13
BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase (ubi... 73 5e-13
BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase (ubi... 73 5e-13
AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone oxidore... 73 5e-13
CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein. 68 2e-11
BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase (ubi... 68 2e-11
AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone oxidore... 68 2e-11
BC021173-1|AAH21173.1| 83|Homo sapiens chromosome 15 open read... 35 0.13
AF228422-1|AAK00708.1| 83|Homo sapiens normal mucosa of esopha... 35 0.13
AB026707-1|BAB61021.1| 83|Homo sapiens FOAP-11 protein protein. 35 0.13
BC035937-1|AAH35937.1| 542|Homo sapiens leucine rich repeat con... 29 5.0
BC016439-1|AAH16439.1| 467|Homo sapiens LRRC56 protein protein. 29 5.0
D42054-1|BAA07654.2| 475|Homo sapiens KIAA0092 protein. 29 8.7
BC039711-1|AAH39711.1| 270|Homo sapiens CEP57 protein protein. 29 8.7
BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein. 29 8.7
BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57k... 29 8.7
AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing ... 29 8.7
AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein. 29 8.7
>U94586-1|AAB52726.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 ALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 313
+LIPL+V +G G GA Y LRLA NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 314 KEESPAPKY 340
K + P +
Sbjct: 73 KLKKERPDF 81
>CR541716-1|CAG46517.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 ALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 313
+LIPL+V +G G GA Y LRLA NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 314 KEESPAPKY 340
K + P +
Sbjct: 73 KLKKERPDF 81
>CR407618-1|CAG28546.1| 81|Homo sapiens NDUFA4 protein.
Length = 81
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 ALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 313
+LIPL+V +G G GA Y LRLA NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 314 KEESPAPKY 340
K + P +
Sbjct: 73 KLKKERPDF 81
>BC105295-1|AAI05296.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 ALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 313
+LIPL+V +G G GA Y LRLA NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 314 KEESPAPKY 340
K + P +
Sbjct: 73 KLKKERPDF 81
>BC101796-1|AAI01797.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 ALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 313
+LIPL+V +G G GA Y LRLA NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 314 KEESPAPKY 340
K + P +
Sbjct: 73 KLKKERPDF 81
>BC101794-1|AAI01795.1| 81|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
Length = 81
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 ALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 313
+LIPL+V +G G GA Y LRLA NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 314 KEESPAPKY 340
K + P +
Sbjct: 73 KLKKERPDF 81
>AF201077-1|AAF09253.1| 81|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit protein.
Length = 81
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 137 ALIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPIRDYS 313
+LIPL+V +G G GA Y LRLA NPDV W+ + NPEPW N QYKFYS DYS
Sbjct: 14 SLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVNVDYS 72
Query: 314 KEESPAPKY 340
K + P +
Sbjct: 73 KLKKERPDF 81
>CR457176-1|CAG33457.1| 87|Homo sapiens LOC56901 protein.
Length = 87
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 140 LIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSK 316
+IP+ + +G G A Y LRLA R+PDV W++K NPEPW N QYKF + DY K
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKK 79
Query: 317 EESPAPKY 340
+ P +
Sbjct: 80 LKKDRPDF 87
>BC011910-1|AAH11910.1| 87|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 4-like 2 protein.
Length = 87
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 140 LIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSK 316
+IP+ + +G G A Y LRLA R+PDV W++K NPEPW N QYKF + DY K
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKK 79
Query: 317 EESPAPKY 340
+ P +
Sbjct: 80 LKKDRPDF 87
>AF164796-1|AAF80760.1| 87|Homo sapiens NADH:ubiquinone
oxidoreductase MLRQ subunit homolog protein.
Length = 87
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 140 LIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPIRDYSK 316
+IP+ + +G G A Y LRLA R+PDV W++K NPEPW N QYKF + DY K
Sbjct: 20 IIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKK 79
Query: 317 EESPAPKY 340
+ P +
Sbjct: 80 LKKDRPDF 87
>BC021173-1|AAH21173.1| 83|Homo sapiens chromosome 15 open reading
frame 48 protein.
Length = 83
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 140 LIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWE 262
LIPL V + + GGA + + + DV ++K NPEPWE
Sbjct: 13 LIPLVVFMTVAAGGASSFAVYSLWKT-DVILDRKKNPEPWE 52
>AF228422-1|AAK00708.1| 83|Homo sapiens normal mucosa of esophagus
specific 1 protein.
Length = 83
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 140 LIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWE 262
LIPL V + + GGA + + + DV ++K NPEPWE
Sbjct: 13 LIPLVVFMTVAAGGASSFAVYSLWKT-DVILDRKKNPEPWE 52
>AB026707-1|BAB61021.1| 83|Homo sapiens FOAP-11 protein protein.
Length = 83
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 140 LIPLYVCVGIGCGGAVFYTLRLAXRNPDVSWNKKTNPEPWE 262
LIPL V + + GGA + + + DV ++K NPEPWE
Sbjct: 13 LIPLVVFMTVAAGGASSFAVYSLWKT-DVILDRKKNPEPWE 52
>BC035937-1|AAH35937.1| 542|Homo sapiens leucine rich repeat
containing 56 protein.
Length = 542
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 261 SHGSGLVFLFQDTSGLRXARRRV*NTAPPHPIPTH 157
+HG+G V T GLR R + PP +P H
Sbjct: 323 THGAGQVLCGNPTKGLRERRHQCQAREPPEQLPQH 357
>BC016439-1|AAH16439.1| 467|Homo sapiens LRRC56 protein protein.
Length = 467
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 261 SHGSGLVFLFQDTSGLRXARRRV*NTAPPHPIPTH 157
+HG+G V T GLR R + PP +P H
Sbjct: 248 THGAGQVLCGNPTKGLRERRHQCQAREPPEQLPQH 282
>D42054-1|BAA07654.2| 475|Homo sapiens KIAA0092 protein.
Length = 475
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 242 SSCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 108
+S S + +A P + + H SP++ KP+ +S+LR S
Sbjct: 10 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 54
>BC039711-1|AAH39711.1| 270|Homo sapiens CEP57 protein protein.
Length = 270
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 242 SSCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 108
+S S + +A P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>BC029385-1|AAH29385.1| 450|Homo sapiens CEP57 protein protein.
Length = 450
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 242 SSCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 108
+S S + +A P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>BC001233-1|AAH01233.1| 500|Homo sapiens centrosomal protein 57kDa
protein.
Length = 500
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 242 SSCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 108
+S S + +A P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>AY239292-1|AAP72184.1| 500|Homo sapiens proliferation-inducing
protein 8 protein.
Length = 500
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 242 SSCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 108
+S S + +A P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
>AY225092-1|AAO73938.1| 500|Homo sapiens translokin protein.
Length = 500
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 242 SSCSKIHQDYAXPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 108
+S S + +A P + + H SP++ KP+ +S+LR S
Sbjct: 9 ASGSHLSNSFAEPSRSNGSMVRHSSSPYVVYPSDKPFLNSDLRRS 53
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,471,205
Number of Sequences: 237096
Number of extensions: 1216095
Number of successful extensions: 3124
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3114
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -