Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0959
         (603 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stath...   122   7e-27
UniRef50_UPI0000D5639F Cluster: PREDICTED: similar to CG31641-PC...    85   2e-15
UniRef50_Q8IPK0 Cluster: CG31641-PB, isoform B; n=10; Diptera|Re...    70   4e-11
UniRef50_A6GDU2 Cluster: Sensor protein; n=1; Plesiocystis pacif...    34   3.0  
UniRef50_Q0F1Z5 Cluster: Pseudouridine synthase; n=1; Mariprofun...    32   9.1  
UniRef50_Q29KL8 Cluster: GA16341-PA; n=2; Eukaryota|Rep: GA16341...    32   9.1  

>UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stathmin
           - Bombyx mori (Silk moth)
          Length = 291

 Score =  122 bits (294), Expect = 7e-27
 Identities = 61/67 (91%), Positives = 61/67 (91%)
 Frame = +1

Query: 307 SRIRSEQTNXFIVATXEALDAKXXTHXEKREAYINELRSRLKDHLEGVEKTRXTLEQQTA 486
           SRIRSEQTN FIVAT EALDAK  TH EKREAYINELRSRLKDHLEGVEKTR TLEQQTA
Sbjct: 83  SRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 142

Query: 487 EVYKAIE 507
           EVYKAIE
Sbjct: 143 EVYKAIE 149



 Score =  112 bits (270), Expect = 5e-24
 Identities = 54/55 (98%), Positives = 54/55 (98%)
 Frame = +2

Query: 62  MEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEXLK 226
           MEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQE LK
Sbjct: 1   MEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLK 55



 Score = 60.1 bits (139), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +3

Query: 510 KMTTAXXKRDENLKKMIQRLREHEEQVRKVR 602
           KMTTA  KRDENLKKMI+RLREHEEQVRKVR
Sbjct: 151 KMTTAADKRDENLKKMIERLREHEEQVRKVR 181


>UniRef50_UPI0000D5639F Cluster: PREDICTED: similar to CG31641-PC,
           isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG31641-PC, isoform C - Tribolium castaneum
          Length = 352

 Score = 84.6 bits (200), Expect = 2e-15
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +1

Query: 307 SRIRSEQTNXFIVATXEALDAKXXTHXEKREAYINELRSRLKDHLEGVEKTRXTLEQQTA 486
           SR + EQT+ FI AT +AL+ K   H EKREAYI +L+++LKDH+E VEKTR ++EQQT 
Sbjct: 90  SRKKDEQTSQFISATRDALEQKMENHTEKREAYITDLKTKLKDHIENVEKTRLSIEQQTD 149

Query: 487 EVYKAIE 507
           EV  AIE
Sbjct: 150 EVRSAIE 156



 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +2

Query: 53  VEAMEVETKSTEIRCQEMSKGGLAYEVILAEP-VGVPVPRRADSPEKTPSVEEIQEXLK 226
           VE +      TE+RCQE ++GGL YEVIL+EP V    P++A SP+ + SV++I++ LK
Sbjct: 4   VEVVVSSPDPTEVRCQEKTRGGLRYEVILSEPEVKATPPKKAVSPKNSMSVQDIEDKLK 62



 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 21/31 (67%), Positives = 28/31 (90%)
 Frame = +3

Query: 510 KMTTAXXKRDENLKKMIQRLREHEEQVRKVR 602
           K+ TA  +RDEN+KKM++RL+EHEEQV+KVR
Sbjct: 158 KLKTASVQRDENIKKMLERLKEHEEQVQKVR 188


>UniRef50_Q8IPK0 Cluster: CG31641-PB, isoform B; n=10; Diptera|Rep:
           CG31641-PB, isoform B - Drosophila melanogaster (Fruit
           fly)
          Length = 302

 Score = 70.1 bits (164), Expect = 4e-11
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = +1

Query: 307 SRIRSEQTNXFIVATXEALDAKXXTHXEKREAYINELRSRLKDHLEGVEKTRXTLEQQTA 486
           +R + E TN FI  T E L++K   H EKREA I++++ +LK H + +EKTR TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 487 EVYKAIE 507
              KAIE
Sbjct: 192 NEQKAIE 198



 Score = 64.9 bits (151), Expect = 1e-09
 Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = +2

Query: 65  EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQEXLK 226
           +V+  +TEIRCQE S+GGL+YEVILAEP   V VP+R  +P K  SVEEI++ LK
Sbjct: 50  KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLK 104



 Score = 32.3 bits (70), Expect = 9.1
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 510 KMTTAXXKRDENLKKMIQRLREH 578
           K+  A   RDEN+KKM+ RL+EH
Sbjct: 200 KLKIAQSLRDENIKKMLDRLKEH 222


>UniRef50_A6GDU2 Cluster: Sensor protein; n=1; Plesiocystis pacifica
           SIR-1|Rep: Sensor protein - Plesiocystis pacifica SIR-1
          Length = 373

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 23  QLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVP 160
           Q+F +LC+  +EAM    +   +R Q   +GG+  +VI  E VGVP
Sbjct: 259 QVFLNLCKNALEAMHERGEVLRLRAQATEEGGVRVDVI-DEGVGVP 303


>UniRef50_Q0F1Z5 Cluster: Pseudouridine synthase; n=1; Mariprofundus
           ferrooxydans PV-1|Rep: Pseudouridine synthase -
           Mariprofundus ferrooxydans PV-1
          Length = 579

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 495 QGHRSKMTTAXXKRDENLKKMIQRLREHEEQVRKVR 602
           Q H+ + T A    DE L+ + Q+L  HE+Q+R++R
Sbjct: 219 QHHKREATNARAHWDEKLQGLQQQLELHEQQIRQLR 254


>UniRef50_Q29KL8 Cluster: GA16341-PA; n=2; Eukaryota|Rep: GA16341-PA -
            Drosophila pseudoobscura (Fruit fly)
          Length = 1501

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +3

Query: 501  HRSKMTTAXXKRDENLKKMIQRLREHEEQVRKVR 602
            H+S       + +E L KM+QR++EHEE+ R+++
Sbjct: 1106 HKSNDDPLVERDNELLNKMMQRMKEHEERARELQ 1139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,155,092
Number of Sequences: 1657284
Number of extensions: 6285468
Number of successful extensions: 22554
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22529
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)