Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0959
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   3.3  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   3.3  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   7.6  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/30 (30%), Positives = 21/30 (70%)
 Frame = +3

Query: 510 KMTTAXXKRDENLKKMIQRLREHEEQVRKV 599
           +MT    +R +++KK+ Q L  +E+Q++++
Sbjct: 741 EMTRKLHQRQQHMKKLQQELLTNEQQLQQL 770


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
 Frame = -3

Query: 334 YSSARCGC---GTPPRSWPS 284
           YSS++CGC      P  WPS
Sbjct: 338 YSSSQCGCPDIPPAPNMWPS 357


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 156 TPTGSASITSYARPPFDISWQRISVDLVSTSMAST 52
           TP    S+  +ARP  +++   +S+   +T +A T
Sbjct: 650 TPNSVGSLQEFARPYRNMATTPVSIRFTNTVIART 684


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,190
Number of Sequences: 2352
Number of extensions: 5694
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)