Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0959
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358185-1|AAQ88552.1|  613|Homo sapiens olfactomedin-like protein.    30   5.4  
AL354928-4|CAI39635.2|  652|Homo sapiens olfactomedin-like 2A pr...    30   5.4  
AB119055-1|BAD38864.1|  652|Homo sapiens photomedin-1 protein.         30   5.4  

>AY358185-1|AAQ88552.1|  613|Homo sapiens olfactomedin-like protein.
          Length = 613

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 331 SSARCGCGTPPRSW-PSSEQWRXSY*LQATSPLFSCLQXLLDLFDG 197
           +  RC C  PP S  P   +W+    L+  +P    LQ ++DL +G
Sbjct: 45  TDCRCSCTAPPSSLNPCENEWKMEK-LKKQAPELLKLQSMVDLLEG 89


>AL354928-4|CAI39635.2|  652|Homo sapiens olfactomedin-like 2A
           protein.
          Length = 652

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 331 SSARCGCGTPPRSW-PSSEQWRXSY*LQATSPLFSCLQXLLDLFDG 197
           +  RC C  PP S  P   +W+    L+  +P    LQ ++DL +G
Sbjct: 84  TDCRCSCTAPPSSLNPCENEWKMEK-LKKQAPELLKLQSMVDLLEG 128


>AB119055-1|BAD38864.1|  652|Homo sapiens photomedin-1 protein.
          Length = 652

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 331 SSARCGCGTPPRSW-PSSEQWRXSY*LQATSPLFSCLQXLLDLFDG 197
           +  RC C  PP S  P   +W+    L+  +P    LQ ++DL +G
Sbjct: 84  TDCRCSCTAPPSSLNPCENEWKMEK-LKKQAPELLKLQSMVDLLEG 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,516,920
Number of Sequences: 237096
Number of extensions: 949420
Number of successful extensions: 3103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3103
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)