Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0958
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.0  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   8.2  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 20/65 (30%), Positives = 26/65 (40%)
 Frame = -3

Query: 521 TCSPWRPFHASRCSVDTQKNKSSCPFPIISLSPDVSITVNRTRNNTVGVGSPINPHHSKV 342
           +CSP     ++ CS  +    S CP      SP  S  V+        VG P NP    V
Sbjct: 237 SCSPLSTASSASCS--SSAAGSLCP-----TSPPAS--VSNGEQPASSVGDPANPQQPSV 287

Query: 341 VFHKV 327
           +F  V
Sbjct: 288 IFSPV 292


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 572 ENNWWVSKHIKK 607
           +NNWW+ + +K+
Sbjct: 125 DNNWWIGRLVKE 136


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 249 KSIAFSPNNNXVHIYKKEGNDWKQTN 326
           + I F  NN  + IY++ G  W + +
Sbjct: 35  EQIIFVRNNRALLIYERMGGSWSEVH 60


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 449 GNYSCSSAYQPSSDLREMVSMENKFAVGSGA 541
           G+Y  +SA +  S + E+ +M + F   SGA
Sbjct: 601 GHYKIASALKNFSQMNELTTMYHYFKGVSGA 631


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,714
Number of Sequences: 2352
Number of extensions: 14292
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)