Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0958
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = -3

Query: 509 WRPFHASRCSVDTQKNKSSCPFPII 435
           W PFHA R      +N    P  ++
Sbjct: 298 WAPFHAQRLLAVYAQNSKDKPEDVL 322


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 322 VCFQSFPSFLYM*TXLLFGENAIDFYP 242
           V F +FP++ +  T  LFG   + ++P
Sbjct: 190 VTFNAFPTYTHEITYSLFGMIMMYWFP 216


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 420 VWTQGDDGKWATTLVLLRINRAATCVKWSPWRTSLLSG 533
           +W   +DGK       L+ +     V++SP   + L G
Sbjct: 9   LWCPDNDGKMVDLTQCLQESSTGQSVEFSPMELNALVG 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,509
Number of Sequences: 438
Number of extensions: 4352
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)