Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0954
(643 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 37 6e-04
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 36 0.001
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 36 0.001
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 35 0.002
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 34 0.003
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 33 0.006
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 33 0.010
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 31 0.023
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 31 0.023
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 31 0.031
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 31 0.041
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 28 0.22
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 27 0.38
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 27 0.67
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 1.2
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 3.6
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 3.6
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 4.7
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 4.7
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 6.2
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 6.2
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 23 8.2
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 36.7 bits (81), Expect = 6e-04
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +1
Query: 367 ITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 492
IT+ +P++R +KYLGV L ++++ PH+K+V +A I+
Sbjct: 732 ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 35.9 bits (79), Expect = 0.001
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 397 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFI 489
+R ++YLGVTL +++ PH+K V +RA I
Sbjct: 727 SRSIRYLGVTLQDKLSWLPHVKEVTERAGKI 757
Score = 25.8 bits (54), Expect = 1.2
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +2
Query: 56 RPLTAGVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQ 226
R +TAGVPQG + DI P + +ADD + + +
Sbjct: 620 RSVTAGVPQGSILGPTLWNTMYDGVLDIALPPDAEILGYADDLVLLVPGTTPDNVKAAAE 679
Query: 227 SAALALGQW 253
A +++ +W
Sbjct: 680 EAIISVMEW 688
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 35.5 bits (78), Expect = 0.001
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 388 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 492
+P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 800 VPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 35.1 bits (77), Expect = 0.002
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Frame = +1
Query: 388 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFI---LGRLYP 507
+P++R +K+LGV + +++ PH+ +V RA I +GRL P
Sbjct: 744 VPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMP 786
Score = 27.5 bits (58), Expect = 0.38
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +2
Query: 56 RPLTAGVPQGXXXXXXXXXXXXNDIPRSP-PTHLAL--FADDTTVYYSSRNKSLIAKKLQ 226
R ++AGVPQG + + R P P + +ADD V R A +
Sbjct: 639 RCVSAGVPQGSILGPTLWNVMYDGVLRIPLPDEAKVIGYADDLVVLAPGRTPEESAAVAE 698
Query: 227 SAALALGQWSE 259
+A A+ QW +
Sbjct: 699 AAVSAVDQWMQ 709
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 34.3 bits (75), Expect = 0.003
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 364 PITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 501
P+ + + R ++YLGV L +++RPH++ V D+A ++ L
Sbjct: 726 PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRAL 771
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 33.5 bits (73), Expect = 0.006
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 5 LSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRS-PPTHLALFADDTTV 181
L +R++ +++ S ++GVPQG ND+ + PP ++LFADD +
Sbjct: 720 LIHRTYIVKIDKHMSKEIVSSSGVPQGSNIGPLLFILFINDVTLALPPDSISLFADDAKI 779
Query: 182 YYSSRN 199
+ N
Sbjct: 780 FAPINN 785
Score = 28.7 bits (61), Expect = 0.17
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 409 KYLGVTLDASMTFRPHIKSVRDRAAFILG 495
K LGV LD+S+ F+ HI V R +LG
Sbjct: 845 KDLGVLLDSSLNFKQHIDDVVARGNQLLG 873
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 32.7 bits (71), Expect = 0.010
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 5 LSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPR-SPPTHLALFADDTTV 181
LSNRS R + S T+GVPQG ND+ PP L+ADD +
Sbjct: 649 LSNRSCRVKTGSYLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNVLPPDGHLLYADDIKI 708
Query: 182 Y 184
+
Sbjct: 709 F 709
Score = 23.8 bits (49), Expect = 4.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 519 RSKMSLRNKVTLYKTCIRPVMTYASVV 599
R + LRN LY +RP++ YAS++
Sbjct: 812 RDQSFLRN---LYYALVRPLLEYASII 835
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 31.5 bits (68), Expect = 0.023
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 358 TPPITLFRQ---PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 492
TPP FR + +R ++YLGV L + +R H+ V ++A+ ++
Sbjct: 771 TPPQVTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKASRVV 818
Score = 27.1 bits (57), Expect = 0.50
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +2
Query: 56 RPLTAGVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQ 226
R +TAGVPQG + D+P P + +ADD + + + + +
Sbjct: 680 RHVTAGVPQGSILGPTLWNIMYDGVLDVPLPPDVEVIGYADDLALLVPATTTDEVRARAE 739
Query: 227 SAALALGQWSE 259
A + +W +
Sbjct: 740 EAVDQVQRWMQ 750
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 31.5 bits (68), Expect = 0.023
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Frame = +1
Query: 214 EEASERSPSPRTVVRKWR----IDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFR 381
E AS+R+ + V W +++ PAK+ V N+ P+ +
Sbjct: 692 EAASQRAEEAVSAVNLWMENHCLELAPAKTELVTISSKRQG---------NINVPVVING 742
Query: 382 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA---AFILGRLYPRSVSGVKC 531
R ++YLGV +D ++++ H++ +A A LG L R+ SG KC
Sbjct: 743 VERRTTRSIRYLGVVIDNQLSWKSHVEYCTTKALRTAKALGCLM-RNHSGPKC 794
Score = 25.4 bits (53), Expect = 1.5
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Frame = +2
Query: 56 RPLTAGVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQ 226
R L+ GVPQG + D+ + FADD + +++ +
Sbjct: 640 RNLSTGVPQGSILGPTLWNVMYDSVLDVQLPEGAEIIAFADDLLLLDPGITPEAASQRAE 699
Query: 227 SAALALGQWSEN 262
A A+ W EN
Sbjct: 700 EAVSAVNLWMEN 711
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 31.1 bits (67), Expect = 0.031
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 397 ARKVKYLGVTLDASMTFRPHIKSVRDRA 480
+R ++YLGVTL +++ PH++ V RA
Sbjct: 794 SRTMRYLGVTLHDHLSWLPHVREVTTRA 821
Score = 23.8 bits (49), Expect = 4.7
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Frame = +2
Query: 56 RPLTAGVPQGXXXXXXXXXXXXN---DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQ 226
R +TAGVPQG + D+ + +ADD + + + + +
Sbjct: 687 RSITAGVPQGSILGPTLWNTMYDGVLDVALPQDCEMVAYADDLVLLIPGIDVNAVKAAAE 746
Query: 227 SAALALGQW 253
A ++ W
Sbjct: 747 EAVASVSHW 755
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 30.7 bits (66), Expect = 0.041
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 397 ARKVKYLGVTLDASMTFRPHIKSVRDRA 480
+R +KYLG+ +D + + HIK V +RA
Sbjct: 711 SRHLKYLGIMIDDRLEYTQHIKYVAERA 738
Score = 25.0 bits (52), Expect = 2.0
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Frame = +2
Query: 11 NRSFRYRV-EGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDI---PRSPPTHLALFADDTT 178
NR Y EG R R +TAGVPQG N++ L FADD
Sbjct: 590 NRVLLYETNEGNRE--RVVTAGVPQGSVLGPTLWNLMYNEVLGLTLYDGASLIGFADDIV 647
Query: 179 VYYSSRNKSLIAKKLQSAALALGQWSEN 262
+ + ++++ + QW E+
Sbjct: 648 LVAVGSRIDDLENTIETSINIIRQWMES 675
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.3 bits (60), Expect = 0.22
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 400 RKVKYLGVTLDASMTFRPHIK 462
R +KYLGV +D ++FR H++
Sbjct: 703 RHLKYLGVIIDDRLSFRKHVE 723
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 27.5 bits (58), Expect = 0.38
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 397 ARKVKYLGVTLDASMTFRPHIKSVRDRA 480
+R +KYLG+ LD + + HI+ +RA
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERA 733
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.6 bits (56), Expect = 0.67
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 400 RKVKYLGVTLDASMTFRPHIK 462
R +KYLGV +D + F+ H++
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLE 784
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.8 bits (54), Expect = 1.2
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +1
Query: 400 RKVKYLGVTLDASMTFRPHIKSVRDRAAFILG 495
+ ++YLGV + ++++PH++ +A ++G
Sbjct: 735 QSIRYLGVQIHDHLSWKPHVELSTAKALRVVG 766
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.2 bits (50), Expect = 3.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 458 ICGRNVIDASRVTPRYLTFLAQGMG 384
+CG +D ++VT TFL G G
Sbjct: 805 VCGARAMDIAKVTCTVNTFLWDGSG 829
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 24.2 bits (50), Expect = 3.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 364 PITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 480
PI + I + ++YLGV + +RPH+ ++A
Sbjct: 720 PIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKA 758
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 406 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 504
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 406 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 504
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 6.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 432 IQGNAQVLDLPGPG 391
+ GN QV + PGPG
Sbjct: 220 LDGNVQVREAPGPG 233
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 6.2
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +2
Query: 56 RPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLAL----FADDTTVYYSSRNKSLIAKKL 223
R ++AGVPQG +D+ R P L FADD + R ++
Sbjct: 615 RTVSAGVPQGSVLGPTLWNVMYDDLLRLPLEGLRADIIGFADDVAFTFLGRTTEQVSALA 674
Query: 224 QSAALALGQW 253
+ + +W
Sbjct: 675 TANLERIERW 684
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 23.0 bits (47), Expect = 8.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 5 LSNRSFRYRVEGTRSSPRPLTAGVPQG 85
+SNR + + + SS AGVPQG
Sbjct: 107 ISNRQNKVHILNSTSSTYTPKAGVPQG 133
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,226
Number of Sequences: 2352
Number of extensions: 15507
Number of successful extensions: 59
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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