Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0953
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ421853-1|ABD77575.1|  500|Homo sapiens synaptojanin 1 protein.       30   6.2  
BC009356-1|AAH09356.1|  384|Homo sapiens CDC42 effector protein ...    30   6.2  
AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.         30   6.2  
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.         30   6.2  

>DQ421853-1|ABD77575.1|  500|Homo sapiens synaptojanin 1 protein.
          Length = 500

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 101 LPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 196
           LP      PL P R PP   + PPTR + P R
Sbjct: 74  LPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR 105


>BC009356-1|AAH09356.1|  384|Homo sapiens CDC42 effector protein
           (Rho GTPase binding) 1 protein.
          Length = 384

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 104 PTPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANP 214
           P P AN P  P   PP +   PP   + PT   +ANP
Sbjct: 232 PAPTAN-PTGPAANPPATTANPPAPAATPTGP-AANP 266


>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
          Length = 1575

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 101  LPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 196
            LP      PL P R PP   + PPTR + P R
Sbjct: 1094 LPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR 1125


>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
          Length = 1311

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 101  LPTPVANSPLSPVRQPPKSNIKPPTRISLPTR 196
            LP      PL P R PP   + PPTR + P R
Sbjct: 1094 LPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR 1125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,441,168
Number of Sequences: 237096
Number of extensions: 1166463
Number of successful extensions: 3508
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3498
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)