Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0951
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106,621... 57 1e-08
11_06_0257 + 21746643-21748091 32 0.43
10_08_0415 - 17761594-17762382 31 0.98
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 31 0.98
03_01_0112 + 902459-902770,903275-903280 30 1.3
09_04_0652 - 19227686-19227926,19229368-19232294 30 1.7
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376... 29 2.3
05_07_0183 + 28251548-28252009,28252172-28252594 29 3.0
03_02_0505 + 8981856-8982879,8983014-8983129,8985407-8985994,898... 29 3.0
11_06_0349 + 22565405-22566279,22567774-22569772,22570360-225704... 29 4.0
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 29 4.0
06_01_0845 - 6430419-6431195 28 5.2
02_01_0389 - 2816878-2817390,2817552-2817670,2817803-2817865,281... 28 5.2
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 28 5.2
10_08_0048 - 14441540-14441620,14442044-14442111,14442275-144424... 28 6.9
11_06_0347 + 22555087-22555943,22556638-22558783 27 9.2
07_03_0602 + 19881998-19882217,19882303-19882496,19883719-198840... 27 9.2
03_06_0126 + 31865339-31867943,31868176-31868660 27 9.2
03_01_0113 + 905535-905840,906601-906812,906929-907196,907314-90... 27 9.2
>08_01_0703 +
6212409-6212456,6212661-6212742,6214031-6214106,
6214498-6214594,6214760-6214862,6214973-6215103,
6215285-6215462,6215528-6215715,6215945-6216154,
6216231-6216578,6216660-6216786,6217304-6217455
Length = 579
Score = 57.2 bits (132), Expect = 1e-08
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Frame = +1
Query: 16 KLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRC--VGHHESTGDAR 189
K AL+S+SDKT L L L G +I++GGTA+ + ++ + + D R
Sbjct: 46 KQALISLSDKTDLAYLGNGLQALGFSIISTGGTASSLEAAGVNVTKVEQITNFPEMLDGR 105
Query: 190 RSGENFTSSGTCWDLSSIIRLCQEDMKRQKYE----MISVVVCNLYPFVQTVSKPDVTVA 357
+ + G + R QE + E VVV NLYPF V+ ++
Sbjct: 106 VKTLHPSVHG-----GILARRDQEHHLKALNEHGIGTFDVVVVNLYPFYNKVTSGVISFE 160
Query: 358 DAVENIDIGGVTLLRA 405
D +ENIDIGG T++RA
Sbjct: 161 DGIENIDIGGPTMIRA 176
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +2
Query: 122 ALRNAGLTVQDVSDITRAPEMLGGRVKTLHPAVHAGILAR 241
+L AG+ V V IT PEML GRVKTLHP+VH GILAR
Sbjct: 81 SLEAAGVNVTKVEQITNFPEMLDGRVKTLHPSVHGGILAR 120
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 485 QTXSDDFWTKQRLALKAFTHTSXYDLAISXY 577
Q DD ++ LA KAF H + YD A+S +
Sbjct: 201 QGKQDDQQFRKMLAWKAFQHVASYDSAVSEW 231
>11_06_0257 + 21746643-21748091
Length = 482
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 184 HLRCSRDVRHILNCEAGVPKRPWRYRHWQST 92
HL C++ R+++N +G WR+R W S+
Sbjct: 300 HLPCAQPCRYLVNTPSGELLHVWRFRQWVSS 330
>10_08_0415 - 17761594-17762382
Length = 262
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/82 (26%), Positives = 34/82 (41%)
Frame = +1
Query: 4 ASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHHESTGD 183
AS K+ + S K L+ K L G + S G R +S C G + +
Sbjct: 84 ASGKKVDASNNSGKPRWLAATKGLDHNGGVGVFSLGAWRYKGVARQSASMCCGQLDHSSG 143
Query: 184 ARRSGENFTSSGTCWDLSSIIR 249
GE + +G C D++ I+R
Sbjct: 144 MHDDGEVWLRAGPCSDIAGIVR 165
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 205 SFHPTSEHLRCSR-DVRHILNCEAGVPKRPWRYRHWQST 92
S HP S H S+ D I +C A V WR RH +T
Sbjct: 791 SHHPFSAHAHYSQPDFPTIASCRAAVASSKWRRRHPSTT 829
>03_01_0112 + 902459-902770,903275-903280
Length = 105
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 193 TSEHLRCSRDVRHILNCEAGVPKRPWRYR 107
T+ LR RD RH+ CE+GVPK R++
Sbjct: 58 TATRLRL-RDGRHLAYCESGVPKEEARFK 85
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 67 KSLSECGLQLIASGGTATGASERRPHSSRCVGHHESTGDARRSGENFTSSGTCW 228
++++E LI + SE+ P S C S + ++G + GTCW
Sbjct: 427 QTVAEGNNSLIPGSESGQVVSEKEPEPSECSESCASVPNLEQTGTSNVEDGTCW 480
>02_01_0521 +
3768072-3768239,3768280-3768337,3769197-3769659,
3769736-3769990,3770763-3770934,3772260-3772910,
3773659-3774045,3774123-3774155,3774239-3774307,
3774388-3774463,3775135-3775223,3775442-3775615,
3775693-3775821
Length = 907
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 375 DVLDRVRHGHVRLRYRLDE-RVQVTDHHAYHLV 280
DVL +R GHV L Y L E DHH LV
Sbjct: 687 DVLKLIRDGHVELHYTLKEFSTPHADHHMDDLV 719
>05_07_0183 + 28251548-28252009,28252172-28252594
Length = 294
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 106 GGTATGASERRPHSSRCVGHHESTGDARRSGENFTSSG 219
GG +G +RR ++ CV E G +GE +G
Sbjct: 92 GGLISGLRDRRSNALTCVSMQEGDGQGEEAGEGDVGAG 129
>03_02_0505 +
8981856-8982879,8983014-8983129,8985407-8985994,
8986091-8986192
Length = 609
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 48 GSTLVSKEPVGMWPAVDCQWRYR----HGRFGTPASQFKMCR 161
G + ++PVG WPA C YR RFG AS +M R
Sbjct: 129 GHVWLDEQPVGPWPAATCP-PYRVSADASRFGDRASASRMAR 169
>11_06_0349 +
22565405-22566279,22567774-22569772,22570360-22570478,
22570835-22571117
Length = 1091
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 16 KLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHH 168
KL D LLS + LS C L+ +A + TG E SS+ H
Sbjct: 773 KLVKFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLESSLSSSQAAPEH 823
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 396 EGHAADVDVLDRVRHGHVRLRYRLDERVQVTDHHAYH 286
+GH D DR HGH R R+ D+R D YH
Sbjct: 1296 DGHDRDHHRHDRRHHGHDR-RHHFDDRGYHYDDRGYH 1331
>06_01_0845 - 6430419-6431195
Length = 258
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +1
Query: 49 GLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHHESTGDARRSGENFTSSGTCW 228
GL +L + ASG AT + P + C G E GD R E G CW
Sbjct: 15 GLQTLIAPDAAAAASRSASGYVATRTLKASPRAVGCPGGGE--GDGEREEEEEGEEGGCW 72
>02_01_0389 -
2816878-2817390,2817552-2817670,2817803-2817865,
2818229-2818355,2818607-2818827,2818973-2819136,
2819766-2819846,2820657-2820728,2820857-2820995,
2821206-2821690,2821995-2822550,2822610-2822666,
2822705-2822774
Length = 888
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 142 HSSRCVGHHESTGDARRSGENFTSSGTCWDLSSIIRLCQEDMKRQKYEMISVV 300
H S G ES DAR G + W ++ + C+ ++ R++ M VV
Sbjct: 781 HQSLDHGSIESIVDARMGGGGGYDINSVWKVADLALHCKREVSRERPTMTEVV 833
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 447 PXXRRRXPGRGSWLCAQEGHAADVDVLDRVRHGHVRLRYRLDERVQ 310
P + PG WL A + A DVDV + Y +++ VQ
Sbjct: 32 PNCMAKPPGSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQ 77
>10_08_0048 -
14441540-14441620,14442044-14442111,14442275-14442493,
14442506-14444508,14447541-14448410,14448533-14448576,
14449920-14450093
Length = 1152
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 46 TGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHHESTGDAR 189
T L A + S C + + TA S RR H VG + GD +
Sbjct: 147 TSTLQTASATSPCSGRTTGAAATAVPFSRRRRHGGGGVGRGPADGDGQ 194
>11_06_0347 + 22555087-22555943,22556638-22558783
Length = 1000
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 16 KLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERRPHSSRCVGHH 168
+L D LLS + LS C L+ +A + TG +R SS+ H
Sbjct: 766 RLVNFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLDRSLSSSQAQPEH 816
>07_03_0602 +
19881998-19882217,19882303-19882496,19883719-19884039,
19885016-19885244,19885554-19885653,19886413-19886539,
19886603-19886780,19886859-19886917,19887082-19887568,
19887682-19887836,19887930-19888100,19888181-19888270,
19888714-19888872,19888940-19889223,19889435-19889498
Length = 945
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 130 PKRPWRYRHWQSTAGHIPTGS 68
P PW++ HWQ+ G + + S
Sbjct: 22 PVHPWQWHHWQNLLGLLSSSS 42
>03_06_0126 + 31865339-31867943,31868176-31868660
Length = 1029
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 435 RRXPGRGSWLCAQEGHAADVDVLDRVRHGHV 343
+R P G G +A++ L R+RH H+
Sbjct: 724 KRLPAMGRGSSHDHGFSAEIQTLGRIRHRHI 754
>03_01_0113 +
905535-905840,906601-906812,906929-907196,907314-907595
Length = 355
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -1
Query: 169 RDVRHILNCEAGVPKRPWRYRHWQSTAGHIPTGSLLTRVDPS 44
RD RH+ E+GV K RY+ H TGS L V PS
Sbjct: 63 RDGRHLAYAESGVRKEDARYK---VVFSHGFTGSRLDSVRPS 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,285,025
Number of Sequences: 37544
Number of extensions: 293295
Number of successful extensions: 1096
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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