Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0951
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58747-1|AAL27234.3|  594|Caenorhabditis elegans Hypothetical pr...    94   6e-20
Z49070-4|CAE45098.2|  528|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U58747-2|AAQ91905.1|  393|Caenorhabditis elegans Hypothetical pr...    29   3.6  
CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical...    28   4.7  
AF036705-9|AAO91724.1|  686|Caenorhabditis elegans Hypothetical ...    28   4.7  

>U58747-1|AAL27234.3|  594|Caenorhabditis elegans Hypothetical
           protein C55F2.1b protein.
          Length = 594

 Score = 94.3 bits (224), Expect = 6e-20
 Identities = 61/137 (44%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
 Frame = +1

Query: 7   SNGK-LALLSVSDKTGLLSLAKSLSECGLQLIASGGTATGASERR--PHSSRCVGHH-ES 174
           ++GK LA++SVSDKTGL+ LA  L   GL LIASGGTA    ++    H    V    E 
Sbjct: 2   TDGKSLAIISVSDKTGLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPEM 61

Query: 175 TGDARRSGENFTSSGTCWDLSSIIRLCQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTV 354
            G   ++       G    L+      ++D+++     +SVVVCNLYPF +TV   D +V
Sbjct: 62  LGGRVKTLHPAVHGGI---LARDTESDRKDLEKHNISFVSVVVCNLYPFKKTVQSKDCSV 118

Query: 355 ADAVENIDIGGVTLLRA 405
            +AVENIDIGGVTLLRA
Sbjct: 119 EEAVENIDIGGVTLLRA 135



 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +2

Query: 119 RALRNAGLTVQDVSDITRAPEMLGGRVKTLHPAVHAGILARLSDSARK 262
           +A+R+ G+ V DV+D+T+ PEMLGGRVKTLHPAVH GILAR ++S RK
Sbjct: 40  KAIRDQGIDVHDVADVTKFPEMLGGRVKTLHPAVHGGILARDTESDRK 87



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +2

Query: 512 KQRLALKAFTHTSXYDLAISXYFRXXYS 595
           +Q LALKAF HT+ YD +IS + R  ++
Sbjct: 169 RQLLALKAFEHTTSYDESISGFMRRRFA 196



 Score = 31.9 bits (69), Expect = 0.38
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 411 KNHDRXTVVXXPADXDXVVXEIK 479
           KNH+R +V+  PAD D ++ E+K
Sbjct: 138 KNHERVSVICDPADYDHIISELK 160


>Z49070-4|CAE45098.2|  528|Caenorhabditis elegans Hypothetical
           protein T09F3.5 protein.
          Length = 528

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = -3

Query: 410 GXARRRVTPPMSMFSTASATVTSGLDTVWTNGYRLQTTTLIISYF*RFMSSWQSRIIELR 231
           G + R    P+++F    A +   L    T    L+  T+I S    FM+ WQ R I   
Sbjct: 265 GKSFRYAPFPVTLFRAELAAIEEALKQ--TVDAELKNVTIITSSA-HFMTGWQRRWIRTT 321

Query: 230 SQHVPLDVKF 201
            +H P   KF
Sbjct: 322 EEHRPYTGKF 331


>U58747-2|AAQ91905.1|  393|Caenorhabditis elegans Hypothetical
           protein C55F2.1c protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 470 RNQXEQTXSDDFWTKQRLALKAFTHTSXYDLAISXYFRXXYS 595
           R+Q      D  + +     KAF HT+ YD +IS + R  ++
Sbjct: 25  RSQSNSRLFDRIYGQMHRGNKAFEHTTSYDESISGFMRRRFA 66


>CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical
           protein C42C1.7 protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 485 QTXSDDFWTKQRLALKAFTHTSXYDLAISXYF 580
           +T  +D++ K  LA+  FTHT    + I  YF
Sbjct: 122 KTGEEDYFEKLSLAMDIFTHTWSLSVEIQFYF 153


>AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical
           protein F37C4.1 protein.
          Length = 612

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 485 QTXSDDFWTKQRLALKAFTHTSXYDLAISXYF 580
           +T ++D++T   +A+  FTHT    + I  YF
Sbjct: 123 KTAAEDYFTMLSIAIDIFTHTWSLSVEIQFYF 154


>AF036705-9|AAO91724.1|  686|Caenorhabditis elegans Hypothetical
           protein F37C4.2 protein.
          Length = 686

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 485 QTXSDDFWTKQRLALKAFTHTSXYDLAISXYF 580
           +T ++D++T   +A+  FTHT    + I  YF
Sbjct: 123 KTVAEDYFTMLSIAIDIFTHTWSLSVEIQFYF 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,138,784
Number of Sequences: 27780
Number of extensions: 221806
Number of successful extensions: 664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)