Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0950
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   0.71 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   3.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   8.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   8.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 49  ECFVHYTCISD 81
           +C V+YTC+SD
Sbjct: 454 DCSVYYTCVSD 464


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 371 FPHSHCPPIQIPPENPNLRHN 309
           +P+   PP  IP +NP L  N
Sbjct: 179 YPNFGVPPAGIPLQNPGLNLN 199


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 228 LSQTHCSPSHAPLGNPSSRQSWS 160
           + QTH SPSH+   + SS +  S
Sbjct: 244 IRQTHKSPSHSVDNSNSSEKKSS 266


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 351 WTMRMWKYTQKCGPK 395
           WT+ M  +   CGPK
Sbjct: 352 WTVDMDDFLGLCGPK 366


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 335 PENPNLRHN*SHSDVVQS 282
           P +PN   + S+S V+QS
Sbjct: 56  PRDPNRARSVSYSTVIQS 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,982
Number of Sequences: 336
Number of extensions: 1971
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)