BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0950
(432 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein. 26 0.66
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 1.5
AY391746-1|AAR28996.1| 502|Anopheles gambiae putative GPCR prot... 23 3.5
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 3.5
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 6.1
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 6.1
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 22 8.1
>AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein.
Length = 94
Score = 25.8 bits (54), Expect = 0.66
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +2
Query: 128 IKLRNCDFTACDQLCRELGFPSGACDGEQCVC 223
++ C C CR G+ G+C +C C
Sbjct: 60 VQTLTCTNPTCSAQCRGRGYRRGSCTIGRCFC 91
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 24.6 bits (51), Expect = 1.5
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 167 LCRELGFPSGACDGEQCVCDNF 232
+C P DG C CDNF
Sbjct: 572 VCERRPNPDELIDGRYCECDNF 593
>AY391746-1|AAR28996.1| 502|Anopheles gambiae putative GPCR
protein.
Length = 502
Score = 23.4 bits (48), Expect = 3.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 26 MLSILCFVSVLCTIHASVININIFNEGLNTNKTSIKLRNC 145
ML I+ V V + + ++ + I+ E +TN ++NC
Sbjct: 374 MLLIVSTVFVCLNLPSYIVRVKIYLETEHTNMNIYLVQNC 413
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.4 bits (48), Expect = 3.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 333 WRYLYWWT 356
WR +YWWT
Sbjct: 274 WRGVYWWT 281
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 22.6 bits (46), Expect = 6.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 167 LCRELGFPSGACD 205
+CRELGF GA +
Sbjct: 804 VCRELGFAGGAIE 816
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 22.6 bits (46), Expect = 6.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 167 LCRELGFPSGACD 205
+CRELGF GA +
Sbjct: 803 VCRELGFAGGAIE 815
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 22.2 bits (45), Expect = 8.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 23 TMLSILCFVSVLCTIHASVINI 88
TML + V +LC + A +INI
Sbjct: 311 TMLICVVIVFLLCNLPAMMINI 332
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,390
Number of Sequences: 2352
Number of extensions: 7868
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -