Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0950
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           25   0.27 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    25   0.48 
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    25   0.48 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   3.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   4.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.5  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   5.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   5.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   5.9  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   7.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   7.8  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   7.8  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   7.8  

>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 152 TACDQLCRELGFPSGACDGEQCVC 223
           +AC   C  LG   G C+   C+C
Sbjct: 33  SACAANCHSLGKAGGHCEKGVCIC 56


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 152 TACDQLCRELGFPSGACDGEQCVC 223
           +AC   C  LG   G C+   C+C
Sbjct: 58  SACAANCLSLGKAGGHCEKVGCIC 81


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 152 TACDQLCRELGFPSGACDGEQCVC 223
           +AC   C  LG   G C+   C+C
Sbjct: 58  SACAANCLSLGKAGGHCEKGVCIC 81


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 135 CVTVTLRLVTSSAVNLGFQVARAMVNNAFAIISSKHV 245
           C+ +  + VTS+AVN   + A  + ++   I   KH+
Sbjct: 10  CLGIACQDVTSAAVNHQRKSANNLAHSMKVIYEWKHI 46


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 207 PSHAPLGNPSSRQSWSQAVKSQLRN 133
           P H   GNP  +Q  ++  + Q  N
Sbjct: 105 PQHVVYGNPQQQQLAAETQQQQQHN 129


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 200 CDGEQCVCDNFLKTRGS 250
           CDG+  +CD    T+G+
Sbjct: 493 CDGKPGLCDAMKPTKGT 509


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 12  DKKSQCYLYCVL 47
           D+K +CY  CVL
Sbjct: 65  DEKLKCYFNCVL 76


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 379 CVYFHIRIVHQYRYRQK 329
           C+Y +I +  +YR R K
Sbjct: 126 CLYLNIWVPQKYRLRHK 142


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 379 CVYFHIRIVHQYRYRQK 329
           C+Y +I +  +YR R K
Sbjct: 126 CLYLNIWVPQKYRLRHK 142


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 104 GLNTNKTSIKLRNCDFTAC 160
           G   N TSI +  CD   C
Sbjct: 100 GRQCNDTSIGVDGCDLMCC 118


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/40 (22%), Positives = 19/40 (47%)
 Frame = +2

Query: 62  TIHASVININIFNEGLNTNKTSIKLRNCDFTACDQLCREL 181
           T++    N+N  N+G+    T I++ +        +C+ L
Sbjct: 52  TLNELNFNLNYVNKGVTYKHTIIEMDSNPIKTALSVCKSL 91


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 104 GLNTNKTSIKLRNCDFTAC 160
           G   N TSI +  CD   C
Sbjct: 101 GRQCNDTSIGVDGCDLMCC 119


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 27  CYLYCVL*VF 56
           CY+YC+L  F
Sbjct: 72  CYMYCLLEAF 81


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 27  CYLYCVL*VF 56
           CY+YC+L  F
Sbjct: 72  CYMYCLLEAF 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,124
Number of Sequences: 438
Number of extensions: 2115
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)