Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0947
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.36 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           24   1.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.5  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    23   2.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 513 TLTSN*KTPTYTSTTRNATITSPPSRL 593
           T T+   T T  +TT+NA+ T+PP ++
Sbjct: 667 TTTTTTTTTTTPNTTQNASATTPPPQV 693


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 481 CPTRNTLTSVMCLLFR 434
           CPTRN    + CL +R
Sbjct: 261 CPTRNVKEMIRCLRYR 276


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 481 CPTRNTLTSVMCLLFR 434
           CPTRN    + CL +R
Sbjct: 132 CPTRNVKEMIRCLRYR 147


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 481 CPTRNTLTSVMCLLFR 434
           CPTRN    + CL +R
Sbjct: 261 CPTRNVKEMIRCLRYR 276


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -3

Query: 466 TLTSVMCLLFRLSIKCDTSGTTISL*VFALDSVVSTDRIISACLLGTL 323
           T+T VMC  F  S        + SL   A  + + +D + + C L  L
Sbjct: 15  TITIVMCQTFTYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQKL 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,972
Number of Sequences: 438
Number of extensions: 3241
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)