Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0945
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.9  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 401 YTNSGSWSYPTPRCSETP 454
           Y N  S+S P P  S TP
Sbjct: 391 YANMNSYSVPEPTISTTP 408


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 348 PALIDLTSSATHARCWGVEIPIVELQS 268
           P+L  +T+    A+  GV +P+  +QS
Sbjct: 388 PSLAAMTTHMKEAKHCGVNVPVPPMQS 414


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 265 TTLQFYNRNFNSP 303
           TTL F+NR F  P
Sbjct: 185 TTLFFFNRTFGVP 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,311
Number of Sequences: 336
Number of extensions: 2755
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)