Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0943
(615 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 158 7e-40
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 157 9e-40
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 157 9e-40
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 94 2e-20
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 90 2e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 70 3e-13
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.006
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.006
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 31 0.10
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 29 0.71
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 28 1.2
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 1.6
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 2.8
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 2.8
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 25 6.6
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 25 6.6
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 8.7
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 8.7
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 25 8.7
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 158 bits (383), Expect = 7e-40
Identities = 74/84 (88%), Positives = 78/84 (92%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLA+TLGVKQLIV VNKM
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKM 155
Score = 141 bits (341), Expect = 8e-35
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
+S+ RFEEI KE S++IKK+G+NP V FV
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFV 189
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 157 bits (382), Expect = 9e-40
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLA+TLGVKQLIV VNKM
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKM 155
Score = 141 bits (341), Expect = 8e-35
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
+S+ RFEEI KE S++IKK+G+NP V FV
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFV 189
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 157 bits (382), Expect = 9e-40
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET KY VT+IDAP HRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLA+TLGVKQLIV VNKM
Sbjct: 132 QTREHALLAYTLGVKQLIVAVNKM 155
Score = 141 bits (341), Expect = 8e-35
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
+S+ RFEEI KE S++IKK+G+NP V FV
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFV 189
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 93.9 bits (223), Expect = 2e-20
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+++ FET +++DAP H+ ++ NMI G SQAD VL+++A GEFEAG + G
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHA+LA T G+ L+V +NKM
Sbjct: 363 QTREHAVLARTQGINHLVVVINKM 386
Score = 80.6 bits (190), Expect = 2e-16
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 236
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 237 AERE 248
ERE
Sbjct: 296 EERE 299
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 90.2 bits (214), Expect = 2e-19
Identities = 43/84 (51%), Positives = 54/84 (64%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+D+A FE+ K I DAP HRDFI MI G S AD AVL+V + FE G +NG
Sbjct: 242 TMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENG 301
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHA L LG+ +++V VNK+
Sbjct: 302 QTREHAYLLRALGISEIVVSVNKL 325
Score = 72.5 bits (170), Expect = 4e-14
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 236
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 237 AER 245
ER
Sbjct: 235 EER 237
Score = 29.9 bits (64), Expect = 0.31
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSY-IKKIGYNPAAVAFV 614
+SE RF+EIK VS + IK +G+ + V FV
Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFV 360
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 69.7 bits (163), Expect = 3e-13
Identities = 36/84 (42%), Positives = 53/84 (63%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI A ++ET+ + +D P H D+IKNMITG + D A+++V+A G+
Sbjct: 103 TISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------- 155
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREH LLA +GVKQ++V +NK+
Sbjct: 156 QTREHLLLARQVGVKQIVVYINKV 179
Score = 35.1 bits (77), Expect = 0.008
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 137
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.006
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 140
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 295 YYVTIIDAPXHRDFIKNMITGTSQADCAVLIV 390
+ V +ID+P H DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.006
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 140
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 295 YYVTIIDAPXHRDFIKNMITGTSQADCAVLIV 390
+ V +ID+P H DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 31.5 bits (68), Expect = 0.10
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 280 FETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 450
FE S Y + IID P H DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 29.1 bits (62), Expect = 0.53
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGI 146
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 28.7 bits (61), Expect = 0.71
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCG 140
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
TI+ A F + +ID P H DF + + D AV I+ G
Sbjct: 80 TINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 271 LWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
++ + Y + +ID P H DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 295 YYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
Y + +ID+P H DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 307 IIDAPXHRDFIKNMITGTSQADCAVLIV 390
IID P H F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 26.6 bits (56), Expect = 2.8
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -1
Query: 288 SFELPESNIDCVPXHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWW 109
S L N D + V +PK I I++ F P S S C+Y S D W
Sbjct: 12 SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71
Query: 108 WT 103
T
Sbjct: 72 RT 73
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 526 TVSPDLRKSRRKYPHTSRRLATTQLLSLSC 615
+ +PD+ ++PHT +R +T + L + C
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRC 174
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +1
Query: 238 LSVXXYTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIV 390
+S+ + +A+ + + ID P H DF+ + + +D VL+V
Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 39 PKMGKEKTHINIVVIGHVDSGKST 110
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 8.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 186 PGPPSRTSRWYVCQYHHIC 130
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 25.0 bits (52), Expect = 8.7
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -1
Query: 267 NIDCVPXHAQPLVCPIPKH 211
N+D + HA P++C + H
Sbjct: 531 NVDLLHLHAYPVICSVSSH 549
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,428,662
Number of Sequences: 5004
Number of extensions: 47941
Number of successful extensions: 183
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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