Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0943
(615 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 173 1e-45
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 173 1e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 169 1e-44
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 169 1e-44
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.016
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 24 1.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 1.8
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 5.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 7.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.6
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.6
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.6
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 173 bits (421), Expect = 1e-45
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFETSKYYVTIIDAP HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG
Sbjct: 15 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 74
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQLIVGVNKM
Sbjct: 75 QTREHALLAFTLGVKQLIVGVNKM 98
Score = 73.3 bits (172), Expect = 2e-15
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
STEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFV
Sbjct: 100 STEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFV 134
Score = 27.5 bits (58), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 216 WVLDKLKAERE 248
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 173 bits (421), Expect = 1e-45
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFETSKYYVTIIDAP HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQLIVGVNKM
Sbjct: 132 QTREHALLAFTLGVKQLIVGVNKM 155
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 73.3 bits (172), Expect = 2e-15
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
STEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFV
Sbjct: 157 STEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFV 191
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 169 bits (412), Expect = 1e-44
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYYVTIIDAP HRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQLIVGVNKM
Sbjct: 132 QTREHALLAFTLGVKQLIVGVNKM 155
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 66.1 bits (154), Expect = 3e-13
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +3
Query: 513 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFV
Sbjct: 158 TDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFV 191
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 169 bits (412), Expect = 1e-44
Identities = 81/82 (98%), Positives = 81/82 (98%)
Frame = +1
Query: 262 DIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 441
DIALWKFETSKYYVTIIDAP HRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 442 REHALLAFTLGVKQLIVGVNKM 507
REHALLAFTLGVKQLIVGVNKM
Sbjct: 61 REHALLAFTLGVKQLIVGVNKM 82
Score = 73.3 bits (172), Expect = 2e-15
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
STEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFV
Sbjct: 84 STEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFV 118
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.016
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 301 VTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
VT +D P H FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.44
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKST 110
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 66 INIVVIGHVDSGKST 110
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 286 TSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLI 387
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 286 TSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLI 387
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 58 FSLPIFG*SRITNCV*Y 8
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 480 TAHRRSKQNGSTEPPYSEPRFEEIKKEV 563
T+ R++ S PP ++PR E + + V
Sbjct: 725 TSLERTQPTMSQMPPTAQPRMERLAEAV 752
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 300 IVLASFELPESNIDCVPXHAQPLVCPIPKHI*RILY 193
IV+ FE+ +S D A IP ++ R+L+
Sbjct: 54 IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMG 194
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 447 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 361
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMG 194
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 147 DKRTIEKFEKEAQEMG 194
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,165
Number of Sequences: 438
Number of extensions: 3334
Number of successful extensions: 24
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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