Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0943
(615 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 149 1e-36
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 97 8e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 89 2e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 65 4e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 62 3e-10
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.15
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.15
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.20
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.20
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 30 1.1
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 30 1.4
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.4
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 29 3.2
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 29 3.2
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 4.3
At3g63410.1 68416.m07139 chloroplast inner envelope membrane pro... 27 9.9
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 27 9.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 27 9.9
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 27 9.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
+T P YS+ R++EI KEVSSY+KK+GYNP + FV
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFV 191
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
+T P YS+ R++EI KEVSSY+KK+GYNP + FV
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFV 191
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
+T P YS+ R++EI KEVSSY+KK+GYNP + FV
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFV 191
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 149 bits (361), Expect = 1e-36
Identities = 70/84 (83%), Positives = 76/84 (90%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAP HRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 130 bits (313), Expect = 9e-31
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 45 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 224
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 225 DKLKAERE 248
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 614
+T P YS+ R++EI KEVSSY+KK+GYNP + FV
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFV 191
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/84 (53%), Positives = 58/84 (69%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+++ FET TI+DAP H+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREH LA TLGV +LIV VNKM
Sbjct: 226 QTREHVQLAKTLGVSKLIVVVNKM 249
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 54 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 233
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 234 KAER 245
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-N 432
T+ +A+ F + +++V ++D+P H+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 304 TMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLK 363
Query: 433 GQTREHALLAFTLGVKQLIVGVNKM 507
GQTREHA + GV+Q+IV +NKM
Sbjct: 364 GQTREHARVLRGFGVEQVIVAINKM 388
Score = 77.4 bits (182), Expect = 7e-15
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +3
Query: 60 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 239
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 240 ERE 248
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ A ++ET + +D P H D++KNMITG +Q D A+L+V+ G
Sbjct: 129 TINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 181
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH LLA +GV ++V +NK
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNK 204
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 42 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 176
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI A ++ET+K + +D P H D++KNMITG +Q D +L+V+ G
Sbjct: 117 TIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP------- 169
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EH LLA +GV L+ +NK+
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKV 193
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 51 KEKTHINIVVIGHVDSGKSTTT 116
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 238 LSVXXYTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
+S+ + + L + Y I+D P H +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 238 LSVXXYTIDIALWKFETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
+S+ + + L + Y I+D P H +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGG 143
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 295 YYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
Y + +ID+P H DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 57 KTHINIVVIGHVDSGKSTTTGHLIYKCG 140
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 283 ETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
E S Y + +ID P H DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 33 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 152
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 301 VTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
+T +D P H F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCG 140
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 295 YYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 450
Y V IID P H DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGI 146
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 295 YYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 450
Y V IID P H DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGI 146
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 69 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 167
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 280 FETSKYYVTIIDAPXHRDFIKNMITGTSQADCAVLIVAAGTG 405
+E + + + +ID P H DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At3g63410.1 68416.m07139 chloroplast inner envelope membrane
protein, putative (APG1) similar to SP|P23525 37 kDa
inner envelope membrane protein, chloroplast precursor
(E37) {Spinacia oleracea}; contains Pfam profile
PF01209: methlytransferase, UbiE/COQ5 family
Length = 338
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 468 PRCQTAHRRSKQNGSTEPPYSEPRFEEIKKE 560
PR A R S + S+ P ++PRF + KKE
Sbjct: 42 PRLSVATRCSSSSVSSSRPSAQPRFIQHKKE 72
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 307 IIDAPXHRDFIKNMITGTSQADCAVLIV 390
+ID P H F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 307 IIDAPXHRDFIKNMITGTSQADCAVLIV 390
+ID P H F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 307 IIDAPXHRDFIKNMITGTSQADCAVLIV 390
+ID P H F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,944,749
Number of Sequences: 28952
Number of extensions: 258931
Number of successful extensions: 839
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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