Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0941
         (646 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54R97 Cluster: Putative uncharacterized protein; n=4; ...    35   1.9  
UniRef50_UPI00004D9DE5 Cluster: UPI00004D9DE5 related cluster; n...    33   4.5  
UniRef50_A0Y1X5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q54R97 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1122

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -2

Query: 579 EESKSPGLPITGIRSLIRLIFEHDLTPLQNVG-LTRNLVY-LLRTEDNAIFKKKIEKI 412
           E+  + G+   GI S I  IFE +L P    G    N+ Y LL T  NA+F+   EKI
Sbjct: 85  EKKTADGIQFPGIFSNILPIFEPELKPETKGGSFQSNITYFLLTTNQNALFQNDYEKI 142


>UniRef50_UPI00004D9DE5 Cluster: UPI00004D9DE5 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00004D9DE5 UniRef100 entry -
           Xenopus tropicalis
          Length = 417

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -1

Query: 298 NSVRKE*FCCKKSVGAFQDIIYYIIRSNCNCIVHASKTTSCKYFMAFVGKNICFI 134
           NS  K  FCC  +     +I Y+ I +NC C  + S      Y+   +  N C I
Sbjct: 201 NSTHKHHFCCPYNC-KHSNIYYFSIHNNCGCFNYYSSNHKHHYYHPHIIHNNCSI 254


>UniRef50_A0Y1X5 Cluster: Putative uncharacterized protein; n=1;
           Alteromonadales bacterium TW-7|Rep: Putative
           uncharacterized protein - Alteromonadales bacterium TW-7
          Length = 101

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = +2

Query: 209 IAIRSYNVIYNVLKSTHAFFTTKSFFSYTILN-SN----LLIFFYCF 334
           I + S NVIY +   T AF  TK  ++ T+L  +N    L+  FYCF
Sbjct: 24  ILLASANVIYGIYALTLAFLVTKPVYTITVLAIANAVWVLICIFYCF 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,866,243
Number of Sequences: 1657284
Number of extensions: 8518251
Number of successful extensions: 20627
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20618
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)