Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0941
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     25   2.0  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     25   2.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.3  

>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
 Frame = +2

Query: 134 YKTNVFAYKRHEIFATRGFRSMYNA----IAIRSYNVIYNVLKSTHAF-----FTTKSFF 286
           Y+   + +   ++  T  ++ +YN          YNV+Y    +T+       F T+ + 
Sbjct: 163 YEIYPYYFFNTDVIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYPMDYYNNFYTEEYL 222

Query: 287 SYTILNSNLLIFFYCF*LDF 346
           +Y   +  L  ++Y F +D+
Sbjct: 223 NYNTEDIGLNAYYYYFMMDY 242


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
 Frame = +2

Query: 134 YKTNVFAYKRHEIFATRGFRSMYNA----IAIRSYNVIYNVLKSTHAF-----FTTKSFF 286
           Y+   + +   ++  T  ++ +YN          YNV+Y    +T+       F T+ + 
Sbjct: 163 YEIYPYYFFNTDVIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYPMDYYNNFYTEEYL 222

Query: 287 SYTILNSNLLIFFYCF*LDF 346
           +Y   +  L  ++Y F +D+
Sbjct: 223 NYNTEDIGLNAYYYYFMMDY 242


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 126  VDLIKQMFLPTNAMKYLQLVVLEAC 200
            VD I Q   PTN  K   ++V E C
Sbjct: 965  VDEINQGMDPTNERKVFNMLVEETC 989


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,413
Number of Sequences: 2352
Number of extensions: 9860
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)