Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0941
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M30148-1|AAA28458.1|  894|Drosophila melanogaster protein ( D.me...    28   9.4  
M30147-1|AAA28456.1|  894|Drosophila melanogaster protein ( D.me...    28   9.4  
M27124-1|AAA28457.1|  894|Drosophila melanogaster protein ( D.me...    28   9.4  

>M30148-1|AAA28458.1|  894|Drosophila melanogaster protein (
           D.melanogaster cGMP-dependent protein kinase (DG2;T2b)
           mRNA, complete cds.).
          Length = 894

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 136 IRSTLSRDVSAYSPISPRARDSQTFVIL 53
           I+  LS+  SAYS  S  A DSQ  V++
Sbjct: 195 IKENLSKSSSAYSTFSSAAEDSQDHVVI 222


>M30147-1|AAA28456.1|  894|Drosophila melanogaster protein (
           D.melanogaster cGMP-dependent protein kinase (DG2;T2a)
           mRNA, complete cds.).
          Length = 894

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 136 IRSTLSRDVSAYSPISPRARDSQTFVIL 53
           I+  LS+  SAYS  S  A DSQ  V++
Sbjct: 195 IKENLSKSSSAYSTFSSAAEDSQDHVVI 222


>M27124-1|AAA28457.1|  894|Drosophila melanogaster protein (
           D.melanogaster cGMP-dependent protein kinase (DG2;T2)
           gene, exons 6, 7 and8. ).
          Length = 894

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 136 IRSTLSRDVSAYSPISPRARDSQTFVIL 53
           I+  LS+  SAYS  S  A DSQ  V++
Sbjct: 195 IKENLSKSSSAYSTFSSAAEDSQDHVVI 222


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,731,853
Number of Sequences: 53049
Number of extensions: 382983
Number of successful extensions: 819
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)