Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0939
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   1.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   2.7  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   3.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   3.6  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.2  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 324 ADREPP*HKGPAVLEPSRETASSNASSV 407
           AD+  P    P+V +PSR   S+NASS+
Sbjct: 141 ADKLTPVLAKPSVSQPSRTHTSTNASSL 168


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 393 WKRQFLSRVPKPQVPCVTVALDRPV 319
           WK+Q L+ +PKP  P    +  RP+
Sbjct: 475 WKKQKLALIPKPGKPPGLASSFRPI 499


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 393 WKRQFLSRVPKPQVPCVTVALDRPV 319
           WKRQ L  +PKP  P       RP+
Sbjct: 453 WKRQRLVLIPKPNKPPGEPGSVRPI 477


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 341 VTQGTCGFGTLERNCLFQRFLRLTPSQYILIWEIVTDD 454
           V  G      LE+  LF+R +   PS+Y++   I T D
Sbjct: 98  VDSGLLDLDVLEQ-ALFERLMLPNPSEYLIPNNITTSD 134


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 393 WKRQFLSRVPKPQVPCVTVALDRPV 319
           WKRQ L  +PKP  P       RP+
Sbjct: 469 WKRQRLVLIPKPGKPSGVSCSYRPL 493


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 393 WKRQFLSRVPKPQVPCVTVALDRPV 319
           WKRQ L  +PKP  P    +  RP+
Sbjct: 449 WKRQKLVLLPKPGKPPDDASALRPL 473


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 34  LCSGFVPEVHPADLQATTDTAPD 102
           +   F+P   P DL  TT  +P+
Sbjct: 395 MARSFIPAREPEDLHTTTHKSPE 417


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 399 KRWKRQFLSRVPKPQVPCVTVALDRPV 319
           ++WK+Q L  +PKP  P    +  RP+
Sbjct: 471 EQWKKQRLVLLPKPGKPPGDPSSFRPI 497


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 396 RWKRQFLSRVPKPQVP 349
           +WKRQ L  +PKP  P
Sbjct: 543 QWKRQRLVLLPKPGKP 558


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,877
Number of Sequences: 2352
Number of extensions: 13253
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)