BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0939 (641 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 22 4.4 DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.8 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.8 AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 5.8 DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 7.7 >DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. Length = 135 Score = 22.2 bits (45), Expect = 4.4 Identities = 7/28 (25%), Positives = 18/28 (64%) Frame = -2 Query: 370 GSKTAGPLCYGGSRSAGQVQYQLYDGKI 287 G +T P+C G + ++ ++ ++Y+G + Sbjct: 25 GIQTLQPICVGETGTSQKIIDEVYNGNV 52 Score = 22.2 bits (45), Expect = 4.4 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = -3 Query: 330 DRPVKSNINCMMGRFN 283 D V+S + CMM +FN Sbjct: 56 DENVQSYVECMMKKFN 71 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 21.8 bits (44), Expect = 5.8 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Frame = -2 Query: 316 VQYQLYDGKIQWMPRYFLDWYTANIPS--VW 230 V+ YD K++W P+ + ++PS +W Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIW 111 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 21.8 bits (44), Expect = 5.8 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Frame = -2 Query: 316 VQYQLYDGKIQWMPRYFLDWYTANIPS--VW 230 V+ YD K++W P+ + ++PS +W Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIW 111 >AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. Length = 355 Score = 21.8 bits (44), Expect = 5.8 Identities = 6/8 (75%), Positives = 7/8 (87%) Frame = -2 Query: 91 CRWWPVGR 68 CR+WP GR Sbjct: 200 CRFWPTGR 207 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 21.4 bits (43), Expect = 7.7 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Frame = -2 Query: 316 VQYQLYDGKIQWMPRYFLDWYTANIPS--VW 230 V+ YD K++W P+ + ++PS +W Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIW 107 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 171,638 Number of Sequences: 438 Number of extensions: 4032 Number of successful extensions: 7 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19315974 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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