Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0938
         (400 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7EDV9 Cluster: Predicted protein; n=1; Sclerotinia scl...    32   3.6  
UniRef50_Q65UI6 Cluster: AlsT protein; n=2; Pasteurellaceae|Rep:...    31   8.3  

>UniRef50_A7EDV9 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 588

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 309 PKHVVF-EGVGDLDPARXLRSSCGVILKDKSGVMMKNPDI 193
           P H    EG  +LDPAR + S C  +   K  +M K+P+I
Sbjct: 260 PSHFEMPEGDEELDPARYIHSRCMAVGYPKERIMKKSPEI 299


>UniRef50_Q65UI6 Cluster: AlsT protein; n=2; Pasteurellaceae|Rep:
           AlsT protein - Mannheimia succiniciproducens (strain
           MBEL55E)
          Length = 489

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -2

Query: 387 LRSSFARSRTEIXXXLGRAAGSVRGGPKHVVFEGVGDLDPARXLRSSCGVILKDKSGVMM 208
           + S+FA S       +  A GS RGGP + + +G+G    +R L ++  + L    G   
Sbjct: 122 MSSAFAESSLAQLFKIKEADGSFRGGPAYYITQGIG----SRWLAAAFAIALIFTFGFAF 177

Query: 207 KNPDINIIIDTRR 169
                N I++  R
Sbjct: 178 NAVQSNSIVEATR 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,649,082
Number of Sequences: 1657284
Number of extensions: 4306865
Number of successful extensions: 8867
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8867
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)