Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0938
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   0.64 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   0.84 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   1.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   2.6  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    21   5.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 0.64
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 135 LNSQHWHCTDA 103
           LNS HWH TD+
Sbjct: 239 LNSFHWHITDS 249


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -2

Query: 300 VVFEGVGDLDPARXLRSSCGVILKDKSGVMMKNPDINIIIDTRRP 166
           VV+EG GD  P++  + +       +   +     + + I  RRP
Sbjct: 284 VVWEGFGDFQPSQVHKQTAICFKAPRYHTLDITEPVKVFIQLRRP 328


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 135 LNSQHWHCTDAR 100
           LN  HWH TD++
Sbjct: 246 LNVLHWHITDSQ 257


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 135 LNSQHWHCTDAR 100
           LN  HWH TD++
Sbjct: 269 LNVFHWHLTDSQ 280


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 341 WAGRLAPSAVDRNMSSSKASXIS 273
           W+ R+AP      ++SS A  +S
Sbjct: 5   WSARVAPEESSSEVTSSSALVMS 27


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 243 GVILKDKSGVMMKNPDINIII 181
           G ILK    ++MKN  +N ++
Sbjct: 69  GCILKHIFNILMKNVTLNDVV 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,349
Number of Sequences: 336
Number of extensions: 998
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)