Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0938
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   0.77 
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   5.4  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = -3

Query: 131 IHNTGTAPTRXSXLCPRLCKK*KDR--SDSKIHQAVNGVRATRC 6
           IH  G  P     LCP  C +  D       +H A   ++  RC
Sbjct: 289 IHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRC 332


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 227 SFRMTPQXERRXRAGSRSPTPSKT 298
           SFR     +RR R  +++PT S T
Sbjct: 243 SFRSLSMHKRRTRKQNKNPTHSST 266


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,085
Number of Sequences: 2352
Number of extensions: 3906
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)