Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0937
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 85 6e-17
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 69 4e-12
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 60 2e-09
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 59 3e-09
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 55 4e-08
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 50 1e-06
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 49 4e-06
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 47 2e-05
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 45 5e-05
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 45 5e-05
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 44 1e-04
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 44 1e-04
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 43 2e-04
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 43 2e-04
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 43 2e-04
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 41 0.001
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 40 0.002
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 40 0.002
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 39 0.003
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 38 0.005
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 38 0.007
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 38 0.007
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 38 0.009
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 38 0.009
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 36 0.028
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 35 0.066
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 35 0.066
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 35 0.066
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 33 0.15
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 33 0.15
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 33 0.20
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 33 0.26
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 32 0.46
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 31 0.61
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 31 0.81
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 31 0.81
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 31 1.1
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 31 1.1
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 30 1.4
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 30 1.9
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 29 3.3
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 29 3.3
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 29 3.3
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 29 4.3
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_14974| Best HMM Match : PA14 (HMM E-Value=0.73) 27 9.9
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/54 (74%), Positives = 44/54 (81%)
Frame = +2
Query: 107 PSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSRNMKL 268
P K RKIA+MG+RSVGKSSL IQFVEGQFVDSYDPTIENTFTK I+ + L
Sbjct: 3 PPKSRKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFL 56
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +1
Query: 244 FEFEEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSK 372
++ +E+ ++LVDTAGQDEYSIFP YSM HGY+LVY++TS+K
Sbjct: 49 YKGQEFFLELVDTAGQDEYSIFPQSYSMGIHGYILVYAVTSAK 91
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 271 LVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLV 450
++DTAGQ+E+S QY G++LV+S+T SF+ + Y+++L + + P+++
Sbjct: 63 ILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIIC 122
Query: 451 GNKTDLHLERKISTEE 498
GNK+DL ER +ST E
Sbjct: 123 GNKSDLEYERTVSTAE 138
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 113 KQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSR 256
KQ K+ ++G VGKS+L IQF++ FV YDPTIE+++ K ++ R
Sbjct: 10 KQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDER 57
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 229 HQVHSFEF---EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIY 399
H+ HS+ + + ++DTAGQ+EYS QY G++ V+++ +SKSF+ +
Sbjct: 264 HRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYR 323
Query: 400 DKLLDMVGKIHVPIVLVGNKTDLHLERKISTEE 498
+++ + VP+VLVGNK DL +R +ST +
Sbjct: 324 EQIKRVKDAEEVPMVLVGNKCDLP-QRTVSTSD 355
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/76 (35%), Positives = 54/76 (71%)
Frame = +1
Query: 265 VKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIV 444
++++DTAG ++++ Y + G++LVYS+ + ++F ++ + ++L + G +VPIV
Sbjct: 53 LEILDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIV 112
Query: 445 LVGNKTDLHLERKIST 492
LVGNK+D++ ER++ST
Sbjct: 113 LVGNKSDIYDEREVST 128
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +2
Query: 113 KQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNS 253
K+ K+ ++G VGKS+L +QFV GQFV+ YDPTIE+ + K I +++
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDN 48
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +1
Query: 253 EEYEVKLVD---TAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVG 423
E+Y+ + D TAG ++++ Y + G++LVYS+ + ++F ++ + ++L + G
Sbjct: 30 EKYDPTIEDFYHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKG 89
Query: 424 KIHVPIVLVGNKTDLHLERKISTEE 498
+VPIVLVGNK+D++ ER++S E
Sbjct: 90 SENVPIVLVGNKSDIYDEREVSVGE 114
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +2
Query: 113 KQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF 229
K+ K+ ++G VGKS+L +QFV GQFV+ YDPTIE+ +
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY 40
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +1
Query: 316 QYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDLHLERKISTE 495
QY + G++++YSIT SF + D++ + +PIVLVGNK DL +R+++T+
Sbjct: 4 QYMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQ 63
Query: 496 E 498
E
Sbjct: 64 E 64
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +1
Query: 262 EVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPI 441
++++ DTAGQ+ + Y + G +++Y IT+ SF V Y + V + V
Sbjct: 64 KLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVF 123
Query: 442 VLVGNKTDLHLERKISTEE 498
+LVG+K D +R +STEE
Sbjct: 124 MLVGHKIDKESKRVVSTEE 142
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2
Query: 116 QRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTI 217
Q +I ++G +VGKSSL+ QF EGQF ++ DPT+
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTV 46
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
E+ ++++ DTAGQ+ + Y + G ++ Y IT+ KSF+ + D K
Sbjct: 54 EKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSK-D 112
Query: 433 VPIVLVGNKTDLHLERKI 486
V I +VGNK+DL RK+
Sbjct: 113 VLIAIVGNKSDLSTNRKV 130
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFT-KYIRLNSRNMKL 268
KI ++G +VGK+ L+ QF +G F + PTI FT K + ++ +KL
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKL 58
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +1
Query: 262 EVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKI---- 429
E+ ++DTAG E S Y + G+V+VYSIT S+++ + + KL+ V K
Sbjct: 16 ELDILDTAGNGEAS-----YIHNGDGFVVVYSITDYYSYEMARQLV-KLVTQVRKTDDIC 69
Query: 430 HVPIVLVGNKTDLHLERKISTEE 498
+PIVLVGNK DL R ++ +E
Sbjct: 70 QIPIVLVGNKRDLRRGRCVAKDE 92
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
++ ++++ DTAGQ+ + Y G +LVY +T+ KSF + K+ D +
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANE-D 61
Query: 433 VPIVLVGNKTDLHLERKIS 489
V +LVGNK D++ +R IS
Sbjct: 62 VKRMLVGNKCDMYDKRVIS 80
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +2
Query: 101 KMPSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF 229
+ P + + ++G VGKS+L+++F G+F+ YDPT+E T+
Sbjct: 122 RFPLRDYSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTY 164
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 292 DEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGK---IHVPIVLVGNKT 462
D S + Y G+++VYSI ++F+ + + KL+ + K + IVL GNK
Sbjct: 181 DTASTYEPVYLSQNEGFIVVYSINELRTFETAKQLV-KLIREIKKQKALTTLIVLAGNKC 239
Query: 463 DLHLERKISTEE 498
DL R +S +E
Sbjct: 240 DLKHCRAVSRQE 251
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 125 IAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSRNMKL 268
I G SVGK+SLI++F+ F D Y PTIE+ F K++ N+ +L
Sbjct: 31 IVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYEL 78
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +1
Query: 244 FEFEEYEVKLVDTAGQDEYSIFPLQYSMDF---HGYVLVYSITSSKSFQIVQIIYDKLLD 414
F E YE++++DT+G E FP +D +VLVYS +SF + ++L+
Sbjct: 71 FNNETYELQIIDTSGTYE---FPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILE 127
Query: 415 MVGKIHVPIVLVGNKTDLHL 474
GK P ++V NK DL L
Sbjct: 128 -GGKNRHPCIVVCNKNDLPL 146
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
++ ++++ DTAGQ+ + Y +G ++ Y IT +F+ V I + + + +
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNV-IRWGEDVQKYAPEN 151
Query: 433 VPIVLVGNKTDLHLERKISTEE 498
+LVGNK DL ER++S E+
Sbjct: 152 AIKLLVGNKKDLEREREVSLED 173
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/49 (36%), Positives = 34/49 (69%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSRNMKL 268
+IA++G VGK++L+++F+ +F+ YDPTIE+ + K I ++ + L
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTL 55
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 232 QVHSFEFEEYEVKLV--DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDK 405
++ + E + +KL DTAGQ+ + Y HG ++VY +T +SF V+ +
Sbjct: 67 KIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQE 126
Query: 406 LLDMVGKIHVPIVLVGNKTDLHLERKI 486
+D +V +LVGNK DL ++ +
Sbjct: 127 -IDRYACENVNKLLVGNKCDLTTKKVV 152
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +2
Query: 65 ILTKSLDSYF*IKMPSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIR 244
I K DS+ + +P+ ++ ++G VGK+SL+ +F+ G F + Y PT+ + + K +
Sbjct: 90 ISKKYKDSWDVLTLPAAVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVT 149
Query: 245 LN 250
L+
Sbjct: 150 LS 151
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +1
Query: 265 VKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIV 444
++++DTAG + + +VLVYS+ S Q + +++ + GK VP+V
Sbjct: 158 LEIMDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKT-VPMV 216
Query: 445 LVGNKTDL 468
LVGNKTDL
Sbjct: 217 LVGNKTDL 224
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/37 (40%), Positives = 29/37 (78%)
Frame = +2
Query: 107 PSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTI 217
PS++ + ++G VGK++L+++FV G+F++ YDPT+
Sbjct: 321 PSEKYSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTL 357
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 277 DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGN 456
DTAGQ+ Y Y G VLVY +T K+FQ V+ ++ + + ++LVGN
Sbjct: 67 DTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPT-IVVMLVGN 125
Query: 457 KTDLHLERKISTEE 498
K DL R +++++
Sbjct: 126 KCDLKHLRAVASDD 139
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF-TKYIRLNSRNMK 265
KI ++G VGKSSL+ +F +F TI F T+ I++ + +K
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIK 62
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 259 YEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVP 438
Y ++L DTAGQ+ + Y G +L+Y +T SF V+ + + + K VP
Sbjct: 491 YALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSK-PVP 549
Query: 439 IVLVGNKTDL 468
I+L GNK D+
Sbjct: 550 IMLCGNKIDI 559
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSRNMKLS 271
+IA+ G VGK+S++ +F G+F + Y+PT+E+ ++K + N M L+
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLN 59
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +1
Query: 271 LVDTAGQDEY------SIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
+VDT G+ S PL Y G V+V+ +T KSF+ V DK+ + G
Sbjct: 21 IVDTPGESRSVFHLAESTVPLIYRA-LSGAVIVFDVTDRKSFERVPTWLDKVQEHCGH-E 78
Query: 433 VPIVLVGNKTD 465
+P+VLVGNKTD
Sbjct: 79 IPVVLVGNKTD 89
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 253 EEYEVKLV--DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGK 426
+++EV+L DTAGQ+ + Y D ++V+ IT+ SF+ V + D G+
Sbjct: 208 DDFEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGE 267
Query: 427 IHVPIVLVGNKTDLHLERKIS 489
V I++VGNK D RK+S
Sbjct: 268 KAV-IIIVGNKMDESDRRKVS 287
Score = 35.1 bits (77), Expect = 0.050
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF-TKYIRLNSRNMKL 268
KI +G + VGKSSL +F+ F + Y PTI F TK + L+ ++L
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRL 214
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEY-SIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKI 429
E +++L DTAGQ+ + Y + + V +Y IT SF+ + +
Sbjct: 93 EFVKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSG 152
Query: 430 HVPIVLVGNKTDLHLERKIST 492
VP +L+GNK DL LER +S+
Sbjct: 153 DVPKILIGNKCDLGLERTVSS 173
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 110 SKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF-TKYIRLNSRNMKL 268
+K KI ++G +VGK+ L + G+F + + TI F K + LN +KL
Sbjct: 44 AKTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKL 97
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +1
Query: 220 EHIHQVHSFEFEEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIY 399
E +++ + E Y +++ DTAGQ+ + + +LVY++ +KSF + +
Sbjct: 247 EFLNKDVKLDGESYTLQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWK 306
Query: 400 DKLL---DMVGKIHVPIVLVGNKTDLHLERKISTEE 498
+ L D+ + + P +L+GNK D+ R +S EE
Sbjct: 307 KEFLYYADVRDQDNFPFILLGNKVDVE-GRAVSQEE 341
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/53 (28%), Positives = 35/53 (66%)
Frame = +2
Query: 110 SKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSRNMKL 268
+K ++ ++G VGKS+L ++F+ +F+ YD T+E+T +++++ ++ L
Sbjct: 14 TKPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSL 66
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYS-IFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKI 429
++ E+ L DTAGQ++Y + PL Y D ++ +SI S S + + +K V
Sbjct: 5975 KQVELALWDTAGQEDYDRLRPLSYP-DTDVILMCFSIDSPDSLENIP---EKWTPEVKHF 6030
Query: 430 --HVPIVLVGNKTDLHLERKISTE 495
+VPI+LVGNK DL ++ E
Sbjct: 6031 CPNVPIILVGNKKDLRMDENTKRE 6054
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/58 (25%), Positives = 35/58 (60%)
Frame = +2
Query: 98 IKMPSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSRNMKLS 271
+ M + ++K+ ++G + GK+ L+I F + QF + Y PT+ + I ++ + ++L+
Sbjct: 5923 LAMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELA 5980
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +1
Query: 262 EVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPI 441
++++ DTAGQ+ + Y HG VL+Y + S++F + +++ + + V
Sbjct: 58 KLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACE-GVNT 116
Query: 442 VLVGNKTDL 468
+LVGNK DL
Sbjct: 117 ILVGNKCDL 125
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF-TKYIRLNSRNMKL 268
K+ ++G VGKSSL+++F + F ++Y TI F + + ++ + +KL
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKL 59
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 YVLVYSITSSKSFQIVQIIYDKLLDMVGK-IHVPIVLVGNKTDLHLERKISTEE 498
++LVYSITS +SF + I +L M + H + +V NKTD +R++ST +
Sbjct: 91 FLLVYSITSLQSFTDISCIIQQLTAMRTQGSHALLAIVANKTDAESQREVSTSD 144
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 QRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF-TKYIRLNSRNMK 265
Q K+ ++G +VGKSSL+++FV+GQF + + TI F T+ + L+ +K
Sbjct: 21 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVK 71
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +1
Query: 277 DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGN 456
DTAGQ+ Y Y ++VY IT+ +F + + K L ++ I L GN
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKELQRQASPNIVIALSGN 134
Query: 457 KTDLHLERKISTEE 498
K DL +R + E+
Sbjct: 135 KADLASKRMVEYED 148
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
E+ ++++ DTAGQ+ + Y HG ++VY +TS+ +F V+ ++
Sbjct: 24 EKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNCD--D 81
Query: 433 VPIVLVGNKTDLHLERKISTEE 498
V +LVGNK D ++ + T +
Sbjct: 82 VIRILVGNKDDCPSKKVVETAD 103
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 262 EVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQ 390
++++ DTAGQ+ Y Y G++L+Y IT+ +SFQ VQ
Sbjct: 71 KLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 EVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSF-QIVQIIYDKLLDMVGKIHVP 438
++++ DTAGQ+ + Y G +LVY I+S ++F + + D + ++
Sbjct: 145 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTD--ARTLASPNIV 202
Query: 439 IVLVGNKTDLHLERKIS 489
I+LVGNK DL +R+++
Sbjct: 203 IILVGNKKDLDADREVT 219
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/71 (28%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +1
Query: 259 YEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLL----DMVGK 426
Y++++VDTAGQ+EY+ F ++++++I S+ S+ ++ + K++ +
Sbjct: 2633 YDIEVVDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTT 2692
Query: 427 IHVPIVLVGNK 459
+P+V+VGNK
Sbjct: 2693 CTIPMVIVGNK 2703
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 YEVKLVDTAGQDEY-SIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHV 435
Y+ + DTAGQ+ + S+ PL Y D +LVY IT +F ++ + + L G +
Sbjct: 9 YKFNIWDTAGQERFKSLAPLYY-RDAAAAILVYDITIESTFHSLR-PWIRELQRYGPQDI 66
Query: 436 PIVLVGNKTDLHLERKISTEE 498
I + GNK D +R + ++
Sbjct: 67 VIAVAGNKCDKADQRDVQVQD 87
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF 229
K+ ++G VGKS+L ++F+ +F+ YD T+E+T+
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY 898
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +1
Query: 259 YEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLL----DMVGK 426
Y++++VD+AGQ+EY+ F ++++++I S+ S+ ++ + K++ +
Sbjct: 23 YDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHKESNTT 82
Query: 427 IHVPIVLVGNK 459
+P+V+VGNK
Sbjct: 83 CTIPMVIVGNK 93
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 340 YVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDLHLERKISTEE 498
+VL+YSITS +SF V Y ++ + V IVL+ NK DL +RK+ T E
Sbjct: 1062 FVLIYSITSRESFHAVWNYYYHVVTSIEAKPV-IVLLANKHDLGHKRKVLTTE 1113
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 37.5 bits (83), Expect = 0.009
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +1
Query: 244 FEFEEYEVKLV--DTAGQDEY-SIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLD 414
F ++ ++KL DTAGQ+ Y SI P Y G LV+ IT +F + D
Sbjct: 394 FLYDNKKIKLTIGDTAGQERYFSILP-AYFRGVQGVFLVFDITVEITFLQLHRWIDLART 452
Query: 415 MVG-KIHVPIVLVGNKTDLHLERKIS 489
G ++ ++LVGNK D+ R ++
Sbjct: 453 TSGADSNIQLILVGNKKDMEDNRAVT 478
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 283 AGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKT 462
AGQ+ + Y HG ++VY IT +S+ + + ++ V ++LVGNK
Sbjct: 376 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLH-KWLMEVETYASEGVHMILVGNKI 434
Query: 463 DLHLERKISTE 495
DL +R++ +
Sbjct: 435 DLDTDREVQPD 445
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +1
Query: 247 EFEEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGK 426
E + ++ + DTAGQ+ + Y G +LVY S ++F ++ +++ K
Sbjct: 53 EGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTK 112
Query: 427 IHVPIVLVGNKTDLHLERK 483
+ +LVGNK D H K
Sbjct: 113 KDIVKMLVGNKIDKHSSSK 131
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENT 226
KI ++G VGKSSL+++F + D++DP I T
Sbjct: 10 KILIVGESGVGKSSLLLRFTD----DTFDPDIGAT 40
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 113 KQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSR 256
K+ IA++G VGKSSLI F F + Y PTIE +K++ N +
Sbjct: 26 KKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEEFVSKHLLYNDQ 73
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 259 YEVKLVDTAGQDEYS-IFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHV 435
Y V L DTAGQ++Y + PL Y M +++ + I S SF+ ++ + L+
Sbjct: 53 YNVGLWDTAGQEDYDRLRPLSYPMT-DVFLVCFDIGSRTSFENIESKWLPELNH-HMPET 110
Query: 436 PIVLVGNKTDL 468
P +LVGNK DL
Sbjct: 111 PKILVGNKRDL 121
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSR 256
K+ ++G VGKS+ +I F Y PT+ + ++ I L+ +
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGK 51
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 277 DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGN 456
DTAGQ+++ Y + +LV+ IT+ +F + + K ++ VLVGN
Sbjct: 66 DTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNK-NILKVLVGN 124
Query: 457 KTDLH-LERKIST 492
KTDL RK++T
Sbjct: 125 KTDLKGASRKVNT 137
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTI-ENTFTKYIRLNSRNMKL 268
K+ ++G VGK+SLI +F +G F D+ T+ + T+ + ++ +KL
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKL 62
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -3
Query: 219 SIVGS*ESTNWPSTNCIIKEDLPTER*PIIAIFLCFEGI 103
SIVGS STN P TNC + D PT P F+G+
Sbjct: 3 SIVGSYFSTNCPVTNCKVNADFPTPPDPSTTTLYSFKGL 41
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 34.7 bits (76), Expect = 0.066
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = +2
Query: 98 IKMPSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSR 256
++ +Q K ++G VGK+SL++ ++ F +SY PT +T+ + +N +
Sbjct: 12 LERKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKK 64
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 265 VKLVDTAGQDEY-SIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIY-DKLLDMVGKIHVP 438
++ DTAGQ+++ ++ PL YS +++ +S+ S SF V + ++ + K P
Sbjct: 68 IEFCDTAGQEDFDALRPLCYS-SADVFIVCFSVVSPTSFANVASKWIPEIREFQPK--AP 124
Query: 439 IVLVGNKTDLHLERKISTE 495
I+LVG +DL KI TE
Sbjct: 125 IILVGTHSDLKDCYKILTE 143
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 34.7 bits (76), Expect = 0.066
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 340 YVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDL 468
+++VYSIT SF + + + G V + LVGNKTDL
Sbjct: 16 FIVVYSITDKNSFNTAVQLVEAVYYGKGTDEVHVALVGNKTDL 58
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 265 VKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIV 444
++L DTAGQ+ + QY G ++ Y +T+ SF ++ + ++ + V +
Sbjct: 947 IQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLK-KWMVSVEEGAEEGVAKM 1005
Query: 445 LVGNKTDL 468
++GNKTDL
Sbjct: 1006 VLGNKTDL 1013
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYS-IFPLQYSMDFHGYVLVYSITSSKSFQIVQIIY-DKLLDMVGK 426
E Y + L DTAGQ++Y + PL Y +++ +S+ S SF+ V+ + ++ K
Sbjct: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQT-DVFLVCFSVVSPSSFENVKEKWVPEITHHCPK 107
Query: 427 IHVPIVLVGNKTDL 468
P +LVG + DL
Sbjct: 108 --TPFLLVGTQVDL 119
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF 229
K ++G +VGK+ L+I + +F Y PT+ + +
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/73 (28%), Positives = 43/73 (58%)
Frame = +1
Query: 277 DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGN 456
DTAGQ+++ Y + ++++ +TS +++ V + + L+ V + ++PIVL GN
Sbjct: 87 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLERVCE-NIPIVLCGN 144
Query: 457 KTDLHLERKISTE 495
K D+ +RK+ +
Sbjct: 145 KVDIK-DRKVKAK 156
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 277 DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVG---KIHVPIVL 447
DTAGQ+ + + + VLV+ +T SF+ + D+ L + P V+
Sbjct: 3 DTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFVV 62
Query: 448 VGNKTDLHLERKISTE 495
+GNK DL R +S +
Sbjct: 63 LGNKIDLE-NRAVSAK 77
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 337 GYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDLHLERKISTEE 498
G +LVY I +++ V+ +L D ++ I+LVGNK+DL R + T+E
Sbjct: 8 GALLVYDIAKHLTYENVERWLKELRDHADS-NIVIMLVGNKSDLRHLRAVPTDE 60
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
+ Y V L DT G I P + ++L + I + +SF ++ + +++
Sbjct: 55 KRYTVLLCDTPGTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETS-D 113
Query: 433 VPIVLVGNKTDLHLERKISTE 495
VP VLVGNK +L ++ ST+
Sbjct: 114 VPKVLVGNKMELRCSQQESTD 134
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 EYEVKLVDTAGQDEYS-IFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
+Y+ L D+AG +++ + PL Y + +++ + I SF+ V + + LD
Sbjct: 54 KYQAVLFDSAGGEDFDRLRPLGYP-NTDIFLVCFDIAHRASFENVALRWLPELDHFSP-G 111
Query: 433 VPIVLVGNKTDL 468
VP VLVGNK DL
Sbjct: 112 VPRVLVGNKKDL 123
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +2
Query: 104 MPSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLN 250
+P KI+++G VGK+SL+ F +F + + PT+++ F + ++
Sbjct: 8 LPPFDYKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMD 56
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Frame = +1
Query: 235 VHSFEFEE--YEVKLVDTAGQDEYSIFPLQYSMDFH---GYVLVYSITSSKSFQIVQIIY 399
+HS + Y +VDTAG Y+ FP+ + H +++V++I S SF+ I
Sbjct: 50 IHSVNMDGVYYSTCIVDTAG--TYA-FPVMRRLAIHTCQAFIVVFAINSESSFREAFEII 106
Query: 400 DKLLDMVGKI-----HVPIVLVGNKTDLHLERKIST 492
D++ + K + + LV NK D+ ++ T
Sbjct: 107 DEIYSIKVKAGSEAKKIILNLVANKLDIDCRERVIT 142
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 125 IAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTFTKYIRLNSRNMKL 268
+A++G VGKS+ ++ + +F+ YDP +E + + ++ + + L
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLAL 231
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSF 378
+ ++L DTAGQ+ + + D G++LV+ +T +SF
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSF 205
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTI 217
K +G VGK+SL+ Q+ + F + PTI
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTI 139
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 328 DFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDLHLERKISTE 495
D G +LVY IT+ KSF+ Q + + ++ V +++GNK D+ R++S E
Sbjct: 84 DDKGIMLVYDITNDKSFEKHQ-NWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKE 138
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 289 QDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDL 468
Q+ Y Y G VLVY I SF + ++L + I+L+GNK+DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASD-DLSIILIGNKSDL 60
Query: 469 -HL 474
HL
Sbjct: 61 KHL 63
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 289 QDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGNKTDL 468
Q+ Y Y G VLVY I SF + ++L + I+L+GNK+DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASD-DLSIILIGNKSDL 60
Query: 469 -HL 474
HL
Sbjct: 61 KHL 63
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 274 VDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVG 453
+DTAG+++Y+ Y ++ Y IT S +++ + LL + + +V+VG
Sbjct: 277 MDTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLL-QAAEPNCLVVIVG 335
Query: 454 NKTDL 468
K DL
Sbjct: 336 CKKDL 340
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 337 GYVLVYSITSSKSFQIVQIIYDKLLDMVGKI-HVPIVLVGNKTDLHLERKI 486
G +LVY IT KSF +Q + + K+ + I+LVGNK D+ +R++
Sbjct: 58 GILLVYDITCRKSFDNLQFWLESI--RKNKLQYEEILLVGNKCDVGDDREV 106
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +1
Query: 253 EEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH 432
++ ++ L DT G +EY + + ++VYS+ S + Q+ V
Sbjct: 56 KKLKIHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDS--LAQVKECTQSAQVNAPA 113
Query: 433 VPIVLVGNKTDLHLERKISTE 495
IVLV NK DL R++ T+
Sbjct: 114 AKIVLVANKMDLPNYRRLETD 134
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 250 FEEYEVKLVDTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQ 381
FE+ V++ T+ YS L Y M FHGY+LVYS S +
Sbjct: 831 FEKRRVQITLTSYHRAYS---LNYQM-FHGYILVYSAIRKASLE 870
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 316 QYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGK----IHVPIVLVGNKTD 465
++ D G +LVY +TS +SF+ + I D++ +G V V+ NK D
Sbjct: 9 EFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD 62
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTI 217
++ ++G VGKS+L ++ + +F+ YD T+
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTL 49
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 283 AGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIH----VPIVLV 450
AGQ+ +S Y V+++ + + I + K LD K+H VP +LV
Sbjct: 76 AGQERFSSMTRVYYKGADACVVLFDLERQTTLDGA-IKWKKDLDSKYKLHSRKPVPCILV 134
Query: 451 GNKTDL 468
GNK+DL
Sbjct: 135 GNKSDL 140
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 316 QYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVG 423
++ D G +LVY +TS +SF+ + I D++ +G
Sbjct: 4 EFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIG 39
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 104 MPSKQRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIEN 223
+P K+A++G +VGK+SL+ + F + + PTI++
Sbjct: 183 LPPVDFKMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDD 222
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 433 VPIVLVGNKTDLHLERKISTEE 498
V I+LVGNKTDL +R+++ EE
Sbjct: 32 VIIMLVGNKTDLSDKRQVTAEE 53
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 122 KIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTI 217
K+ ++G +VGK+S + ++V G Y PTI
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 319 YSMDFHGYVLVYSITSSKSFQIVQIIYDKLL 411
Y + G+VLVYSIT+ +F +Q + +++L
Sbjct: 5 YMKNGQGFVLVYSITAQSTFNDLQDLREQIL 35
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 334 HGYVLVYSITSSKSFQIVQII-YDKLLDMVGKIHVPIVLVGNKTDLHLERKIS 489
H VL ++I + SF+ V + Y ++ + VPI+LVG K+D + +S
Sbjct: 106 HVIVLCFAINTPSSFKDVNAVWYPEIKKYCPR--VPIILVGTKSDWRSQLNVS 156
>SB_14974| Best HMM Match : PA14 (HMM E-Value=0.73)
Length = 611
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 337 HENPYYIEVEIYCIHPDRLCLLA*LHIPRIQTNVL 233
H++ + VE+YC R L+ LH I TN++
Sbjct: 511 HQDIRQLIVEVYCGITQRYMLVTPLHFDHIMTNIV 545
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,510,375
Number of Sequences: 59808
Number of extensions: 347169
Number of successful extensions: 727
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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