Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0937
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            40   7e-05
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    37   6e-04
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   3.6  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    23   6.3  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 25/74 (33%), Positives = 34/74 (45%)
 Frame = +1

Query: 277 DTAGQDEYSIFPLQYSMDFHGYVLVYSITSSKSFQIVQIIYDKLLDMVGKIHVPIVLVGN 456
           DTAGQ+ Y      Y       ++VY I +S SF   +  + K L      ++ I L GN
Sbjct: 79  DTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAK-TWVKELQRQASPNIVIALAGN 137

Query: 457 KTDLHLERKISTEE 498
           K DL   R +  EE
Sbjct: 138 KADLANSRVVDYEE 151



 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 17/38 (44%), Positives = 27/38 (71%)
 Frame = +2

Query: 116 QRKIAMMGYRSVGKSSLIIQFVEGQFVDSYDPTIENTF 229
           Q K+ ++G  +VGKSSL+++FV+GQF +  + TI   F
Sbjct: 24  QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 61


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 36.7 bits (81), Expect = 6e-04
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +1

Query: 271 LVDTAGQDEYS-IFPLQYSMDFHGYVLVYSITSSKSFQ-IVQIIYDKLLDMVGKIHVPIV 444
           L DTAGQ++Y  + PL Y      +++ YS+ S  SF+ +    Y ++         PI+
Sbjct: 58  LWDTAGQEDYDRLRPLSYPQT-DVFLICYSVASPSSFENVTSKWYPEIKHHCPD--APII 114

Query: 445 LVGNKTDLHLERK 483
           LVG K DL  +R+
Sbjct: 115 LVGTKIDLREDRE 127


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 259 IPRIQTNVLGECVLYCWVIRINKLAFHELYY 167
           I ++QT  +G   L+ W+  I  +  H  YY
Sbjct: 127 IAKVQTTCMGAVTLFYWIAPIPSICAH--YY 155


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 124 LSLFRRHFYLKVTIQRFCKDKLNKVLLKF 38
           L L +  F   +++  +C+D+LN VL ++
Sbjct: 98  LFLQQPDFATLMSVATYCRDRLNPVLFQY 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,659
Number of Sequences: 2352
Number of extensions: 12431
Number of successful extensions: 65
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)