Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0935
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21968| Best HMM Match : THF_DHG_CYH (HMM E-Value=0.0018) 90 1e-18
SB_18696| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0) 33 0.26
SB_24382| Best HMM Match : F5_F8_type_C (HMM E-Value=4.90006e-41) 32 0.35
SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033) 32 0.46
SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12) 31 0.81
SB_56787| Best HMM Match : Keratin_B2 (HMM E-Value=0.34) 27 1.8
SB_45959| Best HMM Match : DUF1091 (HMM E-Value=3.6) 29 2.5
SB_31184| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_49126| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12) 29 2.5
SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 2.5
SB_15386| Best HMM Match : CSE2 (HMM E-Value=0.18) 29 2.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43) 29 4.3
SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 29 4.3
SB_1962| Best HMM Match : Leu_leader (HMM E-Value=5.2) 29 4.3
SB_58594| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2) 28 5.7
SB_44251| Best HMM Match : Transposase_5 (HMM E-Value=0.072) 28 5.7
SB_22943| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_16136| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0025) 28 5.7
SB_45989| Best HMM Match : TFIIE_alpha (HMM E-Value=5) 28 7.5
SB_32724| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0029) 28 7.5
SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9) 28 7.5
SB_2592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_34670| Best HMM Match : Tctex-1 (HMM E-Value=0.0027) 28 7.5
SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_523| Best HMM Match : zf-C2H2 (HMM E-Value=4.9) 27 9.9
>SB_21968| Best HMM Match : THF_DHG_CYH (HMM E-Value=0.0018)
Length = 101
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/84 (48%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 ITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTINEGRV 439
+ ++++L + LN+ ++HGIIVQ+P DS++ ID T+AV P+KDVDGL+ N GR+
Sbjct: 17 LCDMQVLKAVDELNKDSAIHGIIVQLPPDSENPIDPGICTNAVIPEKDVDGLHDENAGRL 76
Query: 440 AVGDLSG-FIPCTPAGCVELIKKT 508
A G+L+ +PCTP GC+ELIKK+
Sbjct: 77 ARGELATCIVPCTPRGCLELIKKS 100
>SB_18696| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0)
Length = 119
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 595 HATVTVCHSKTKNLSEI 645
+ATVT+CHS+TKNL E+
Sbjct: 13 NATVTICHSRTKNLKEM 29
>SB_24382| Best HMM Match : F5_F8_type_C (HMM E-Value=4.90006e-41)
Length = 316
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 146 PGLEARPF*TQPRHLLTQVIFYRSCNFNPRYNLCHLSPENCLV 18
P L RPF T+ R + +Q +F R + RY C L +CL+
Sbjct: 21 PPLFTRPFFTRIRTIYSQPVFIRRTLMDNRYRSCLLKGFSCLI 63
>SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)
Length = 999
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 481 RVRGTD*EDRVTIAGKNVVVLGRSRIVGTPVSELLKWEH 597
++R +TI KN+ + +SR++G ++E L W+H
Sbjct: 134 KLRNLPCHPNITIDDKNIKQIRQSRVLGIEINEHLNWDH 172
>SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12)
Length = 633
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -2
Query: 519 YSDAVFLISSTHPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASV 376
+S+ VFL + THP G++G+ P + +F+ S+S GE+A V
Sbjct: 72 WSNCVFLETLTHPHGLKGVRYIEVPQTY--LVPIFRKSSSFKGESAMV 117
>SB_56787| Best HMM Match : Keratin_B2 (HMM E-Value=0.34)
Length = 527
Score = 26.6 bits (56), Expect(2) = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 511 VTIAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHS 621
+T ++V + RSR GT +S ++ TVT CH+
Sbjct: 358 ITSRSRHVTITSRSRH-GTIISRSRHHDNITVTTCHN 393
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +1
Query: 595 HATVTVCHSK---TKNLSEIT 648
H TVT CH+ TK L+ IT
Sbjct: 421 HITVTTCHNHTTVTKCLNHIT 441
>SB_45959| Best HMM Match : DUF1091 (HMM E-Value=3.6)
Length = 360
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 505 DRVTIAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNL 636
D +TI GK + V+ ++++G +S+ L W V +K L
Sbjct: 122 DAITIEGKELEVVKSTKLLGLTISDNLSWNAHVNEVVKKSSKKL 165
>SB_31184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 505 DRVTIAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNL 636
D +TI GK + V+ ++++G +S+ L W V +K L
Sbjct: 540 DAITIEGKELEVVKSTKLLGLTISDNLSWNAHVNEVVKKSSKKL 583
>SB_49126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 505 DRVTIAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNL 636
D +TI GK + V+ ++++G +S+ L W V +K L
Sbjct: 388 DAITIEGKELEVVKSTKLLGLTISDNLSWNAHVNEVVKKSSKKL 431
>SB_32094| Best HMM Match : RVT_1 (HMM E-Value=1.9e-12)
Length = 642
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 505 DRVTIAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNL 636
D +TI GK + V+ ++++G +S+ L W V +K L
Sbjct: 458 DAITIEGKELEVVKSTKLLGLTISDNLSWNAHVNEVVKKSSKKL 501
>SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1482
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 260 ITEIELLAKITSLNESPSVHGIIVQMPLD---SDHAIDAHRVTDAVSPDKDVDGLNTINE 430
+ +++++ +T L++ V G+ + +D D +D V D+V+ DVDG+ +++
Sbjct: 497 LDDVDVVEDVTLLDDVDVVDGVTLLDDVDVVDGDPLLDDVDVVDSVAELDDVDGVTLLDD 556
Query: 431 GRVAVGD 451
V GD
Sbjct: 557 VDVVDGD 563
>SB_15386| Best HMM Match : CSE2 (HMM E-Value=0.18)
Length = 379
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 505 DRVTIAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNL 636
D +TI GK + V+ ++++G +S+ L W V +K L
Sbjct: 195 DAITIEGKELEVVKSTKLLGLTISDNLSWNAHVNEVVKKSSKKL 238
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -2
Query: 549 PPEHYHIFA---SYSDAVFLISSTHPAGVQGMNPDRSPTATRPS 427
P HY +FA SY+D + ++ +G G+NP PT PS
Sbjct: 313 PTTHYTVFARVASYTDWIKRMTVVGTSGGGGVNPPPPPTNNPPS 356
>SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1525
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 486 HPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASVTR*ASIA-WSES 343
HP G+ + D +PT+TR S++ K +T LS +TR I W+++
Sbjct: 258 HPEGLVLICGDFNPTSTRFSVVATKRATGLSQIVKVLTRDTGILDWAKT 306
>SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43)
Length = 607
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = -2
Query: 570 RSTHDATPPEHYHIFASYSDAVFLISSTHPAGVQGMNPDRSPTATRPSLIVFKPSTSLSG 391
R AT ++ + + V ++HP + + D +P +T+ SL+VF + LS
Sbjct: 503 RGKKAATAKDNDNFYNYVQSVVDDYQASHPDCLVCVTRDFNPNSTKISLVVFNRACGLSQ 562
Query: 390 ETASVTR 370
T +TR
Sbjct: 563 ITKVLTR 569
>SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 1414
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = -2
Query: 555 ATPPEHYHIFASYSDAVFLISSTHPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASV 376
AT ++ ++ V S++HP + D +P AT S +VFK S L+ T +
Sbjct: 800 ATGADNNDLYNHVQVTVDAYSASHPECLVCAAGDFNPNATNISPVVFKRSCGLTQITKVL 859
Query: 375 TR 370
TR
Sbjct: 860 TR 861
>SB_1962| Best HMM Match : Leu_leader (HMM E-Value=5.2)
Length = 140
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 457 RIHSLHSGRVRGTD*EDRVTIAGKNVVVLGRSRIVGTPVSELLKWE 594
R+HSL SGR V+ + KN+ + +I+G +SE LKW+
Sbjct: 68 RVHSLDSGR-------PVVSTSDKNLDYVSVYKILGVNISEHLKWD 106
>SB_58594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1001
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 486 HPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASVTR 370
HP G+ + D +PT+TR S++ K +T LS +TR
Sbjct: 883 HPEGLVLICGDFNPTSTRFSVVATKRATGLSQIVKVLTR 921
>SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)
Length = 615
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 280 SKNHESERISFRSRHHCSNAP 342
+K+++S +I FR R HC N P
Sbjct: 63 TKSYQSVQIQFRKRFHCRNFP 83
>SB_44251| Best HMM Match : Transposase_5 (HMM E-Value=0.072)
Length = 221
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 280 SKNHESERISFRSRHHCSNAP 342
+K+++S I FR R HC N P
Sbjct: 18 TKSYQSAHIQFRKRFHCRNFP 38
>SB_22943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 816
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 486 HPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASVTR 370
HP G+ + D +PT+TR S++ K +T LS +TR
Sbjct: 260 HPEGLVLICGDFNPTSTRFSVVATKRATGLSQIVKVLTR 298
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 93 LRQQVTRLRSKWSGFEPRLAIVQVGGREDS 182
+RQ V + SK+ G PR AI Q+GG D+
Sbjct: 597 VRQPVNDVTSKYPG-SPRNAIAQIGGSRDA 625
>SB_16136| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0025)
Length = 731
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 486 HPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASVTR 370
HP G+ + D +PT+TR S++ K +T LS +TR
Sbjct: 534 HPEGLVLICGDFNPTSTRFSVVATKRATGLSQIVKVLTR 572
>SB_45989| Best HMM Match : TFIIE_alpha (HMM E-Value=5)
Length = 194
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 505 DRVTIAGKNVVVLGRSRIVGTPVSELLKW 591
D +TI GK + V+ ++++G +S+ L W
Sbjct: 13 DAITIEGKELEVVKSTKLLGLTISDNLSW 41
>SB_32724| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0029)
Length = 302
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 486 HPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASVTR 370
HP G+ + D +PT+TR S++ K +T LS +TR
Sbjct: 151 HPEGLVLICGDFNPTSTRFSVVATKRATCLSQIAKVLTR 189
>SB_20652| Best HMM Match : OmpH (HMM E-Value=1.9)
Length = 842
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 39 KMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQ 161
K A + +G +AG I++ + +QVTR + +GF L + Q
Sbjct: 2 KKAAVAAGASIAGHIKHAIAEQVTRAK---TGFPRSLTLAQ 39
>SB_2592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 137 EARPF*TQPRHLLTQV---IFYRSCNFNPRYNLCHL 39
+ARP P L T+ + Y +C+ +P +NLC L
Sbjct: 123 DARPLLLHPNKLFTKRRGRVSYYNCSTSPSFNLCEL 158
>SB_34670| Best HMM Match : Tctex-1 (HMM E-Value=0.0027)
Length = 471
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = -3
Query: 593 SHFSNSDTGVPTMRLRPSTTTFLPAIV 513
S F++S+TGVP++RLR ++ + A+V
Sbjct: 219 STFNSSNTGVPSIRLRRASNPPITALV 245
>SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = -2
Query: 555 ATPPEHYHIFASYSDAVFLISSTHPAGVQGMNPDRSPTATRPSLIVFKPSTSLSGETASV 376
A+ ++ +++ + V +HP + + D +PT+T+ S + FK S L+ +
Sbjct: 28 ASAEDNNMLYSHVQETVDRFLRSHPEALVCVTGDFNPTSTKISPVPFKRSAGLTQTVNVL 87
Query: 375 TR 370
TR
Sbjct: 88 TR 89
>SB_523| Best HMM Match : zf-C2H2 (HMM E-Value=4.9)
Length = 149
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 341 LDSDHAIDAHRVTDAVSPDKDVDGLNTINEGRVAVGDLSGFIPC---TPAGCVELIKKTA 511
L + A + V D V P+ +V + EG+ V SG+ P +GC +L
Sbjct: 73 LSAKLAASRNHVRDHVQPEDEVFSKPRVKEGKNRVKSPSGYSPVDMFVCSGCDKLYNSQK 132
Query: 512 SL*LAKMW*CSGGV 553
L + K + C G V
Sbjct: 133 DLDIQKSF-CYGNV 145
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,770,585
Number of Sequences: 59808
Number of extensions: 392791
Number of successful extensions: 941
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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