Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0935
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41552-3|AAC69100.2|  303|Caenorhabditis elegans Dauer or aging ...    84   7e-17
Z50741-1|CAA90609.1|  395|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AF039049-11|AAB94246.1|  499|Caenorhabditis elegans Cytochrome p...    30   1.2  
Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    29   3.8  
AF100656-5|AAF99963.2|  259|Caenorhabditis elegans Hypothetical ...    29   3.8  
U50197-4|AAA91257.1|  443|Caenorhabditis elegans Intermediate fi...    28   5.0  

>U41552-3|AAC69100.2|  303|Caenorhabditis elegans Dauer or aging
           adult overexpressionprotein 3 protein.
          Length = 303

 Score = 84.2 bits (199), Expect = 7e-17
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = +2

Query: 260 ITEIELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTINEGRV 439
           IT+ +L  +I +LN    + GII+Q+PLD  H IDA  V D + P KDVDGL  IN GR+
Sbjct: 75  ITQGDLKREIMALNHDNEIDGIIIQLPLDCKHEIDADSVIDLIDPLKDVDGLTRINAGRL 134

Query: 440 AVGDLSGFI-PCTPAGCVELIKK 505
           A G+L   I PCTP GC+ L+++
Sbjct: 135 ARGELQRTIFPCTPFGCLYLVQQ 157



 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +3

Query: 42  MAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEK 221
           +A+I+SG+E +  + +D+ Q++ + R     F   LAIVQVG R DSNVYI  KLK A++
Sbjct: 2   VAEIVSGLEYSKKVLHDVGQKIAKTREHHPNFHAVLAIVQVGNRSDSNVYINSKLKKAKE 61

Query: 222 IGIAAEHIRLPGT 260
           IG   + I+LP T
Sbjct: 62  IGADGKLIKLPDT 74



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +1

Query: 517 IAGKNVVVLGRSRIVGTPVSELLKWEHATVTVCHSKTKNLSE 642
           ++GK VVVLGRS+IVG+P + L  W H TVT+CHSKT NL E
Sbjct: 165 VSGKEVVVLGRSKIVGSPAAALFLWHHGTVTICHSKTPNLKE 206


>Z50741-1|CAA90609.1|  395|Caenorhabditis elegans Hypothetical
           protein F55G7.1 protein.
          Length = 395

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 146 PGLEARPF*TQPRHLLTQVIFYRSCNFNPRYNLCH 42
           P     PF +QP+H+     F++S N N  ++LC+
Sbjct: 57  PNFRRVPFSSQPQHVSNAQSFHQSPNSNDSFSLCY 91


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 584 SNSDTGVPTMRLRPSTTTFLPAIVTRSS*SVPRT 483
           + + T  PT   +P+TTT  PA  T S+ S+P T
Sbjct: 436 TTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTT 469


>AF039049-11|AAB94246.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 35B2 protein.
          Length = 499

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 406 NIFIRRDSISDSMSVDRVVRIKGHLNNDAVNGRRFVQTRDF 284
           NI + RDS+ + +  +   R +  ++ DAVNG+  VQT DF
Sbjct: 134 NIGVGRDSMEERILEELDARCE-EIDADAVNGKTVVQTSDF 173


>Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical
           protein F36G3.3 protein.
          Length = 141

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -2

Query: 591 PFQQL*HRSTHDATPPEHYHIFASYSDAVFLISSTHPAGVQGMNP 457
           P Q + H S+H   PP HYH    + + V + S  +     G  P
Sbjct: 16  PTQPVYHPSSHVTAPPYHYHDNGGFENVVDVNSPVYTTLASGPMP 60


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 620 EWHTVTVACSHFSNSDTGVPTMRLRPSTTTFL 525
           +WH       H SN+   VP  +  PST+T+L
Sbjct: 698 DWHVKQNLARHGSNNSAAVPYRQWYPSTSTWL 729


>AF100656-5|AAF99963.2|  259|Caenorhabditis elegans Hypothetical
           protein F49F1.6 protein.
          Length = 259

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 563 PTMRLRPSTTTFLPAIVTRSS*SVPRTRPECKE 465
           PT  + PSTTT LPA  T+   S    +P CK+
Sbjct: 193 PTTTVVPSTTTKLPATTTKKLPST-TPKPPCKD 224


>U50197-4|AAA91257.1|  443|Caenorhabditis elegans Intermediate
           filament, d protein 2 protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +3

Query: 39  KMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLA 152
           K+ +I  G E   SI+N  R+++ R+RS  + F  +L+
Sbjct: 288 KITEIKKGSESYSSIQNQAREEILRIRSIVNEFRGKLS 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,362,506
Number of Sequences: 27780
Number of extensions: 282846
Number of successful extensions: 748
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)