Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0931
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro...    31   0.87 
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA...    31   0.87 
Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei...    31   1.1  

>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
           protein.
          Length = 1127

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 138 TSESERIDRASREPLDRGEREKTNSAR 58
           T   ER++R  +EP+D+G  E+ +S R
Sbjct: 82  TERKERVERPRKEPVDKGHHERIDSER 108


>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
           protein.
          Length = 1127

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 138 TSESERIDRASREPLDRGEREKTNSAR 58
           T   ER++R  +EP+D+G  E+ +S R
Sbjct: 82  TERKERVERPRKEPVDKGHHERIDSER 108


>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
           SA protein.
          Length = 1116

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 138 TSESERIDRASREPLDRGEREKTNSAR 58
           T   ER++R  +EP+D+G  E+  S R
Sbjct: 71  TERKERVERPRKEPVDKGHHERIQSER 97


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,266,861
Number of Sequences: 53049
Number of extensions: 267632
Number of successful extensions: 786
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)