Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0930
         (585 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014431-1|AAH14431.2|  146|Homo sapiens CYB5B protein protein.        31   4.0  
BC004373-1|AAH04373.1|  146|Homo sapiens CYB5B protein protein.        31   4.0  
AB009282-1|BAA23735.1|  146|Homo sapiens cytochrome b5 protein.        31   4.0  

>BC014431-1|AAH14431.2|  146|Homo sapiens CYB5B protein protein.
          Length = 146

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 237 FPREASGGAEWLELSKGTDITEAFESHHLNSSVNKVLEKYYV 362
           F  E  GG E L    G D +E+FE    +S   ++L++YY+
Sbjct: 51  FLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYI 92


>BC004373-1|AAH04373.1|  146|Homo sapiens CYB5B protein protein.
          Length = 146

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 237 FPREASGGAEWLELSKGTDITEAFESHHLNSSVNKVLEKYYV 362
           F  E  GG E L    G D +E+FE    +S   ++L++YY+
Sbjct: 51  FLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYI 92


>AB009282-1|BAA23735.1|  146|Homo sapiens cytochrome b5 protein.
          Length = 146

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 237 FPREASGGAEWLELSKGTDITEAFESHHLNSSVNKVLEKYYV 362
           F  E  GG E L    G D +E+FE    +S   ++L++YY+
Sbjct: 51  FLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYI 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,816,424
Number of Sequences: 237096
Number of extensions: 1320527
Number of successful extensions: 6641
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6641
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)