Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0930
         (585 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to ...    32   0.24 
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ...    31   0.43 
At4g22970.1 68417.m03315 peptidase C50 family protein contains P...    29   1.7  
At5g10150.1 68418.m01175 expressed protein                             28   4.0  
At4g32730.2 68417.m05680 myb family transcription factor identic...    27   7.0  
At4g32730.1 68417.m05679 myb family transcription factor identic...    27   7.0  
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ...    27   9.2  
At2g32720.1 68415.m04004 cytochrome b5, putative similar to Cyto...    27   9.2  

>At1g77760.1 68414.m09053 nitrate reductase 1 (NR1) identical to
           SP|P11832 Nitrate reductase 1 (formerly EC 1.6.6.1)
           (NR1){Arabidopsis thaliana}
          Length = 917

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +3

Query: 237 FPREASGGAEWLELSKGTDITEAFESHHLNSSVNKVLEKYYV 362
           F ++  GG + + ++ GTD TE FE+ H +    K+LE Y +
Sbjct: 576 FLKDHPGGTDSILINAGTDCTEEFEAIH-SDKAKKLLEDYRI 616


>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
           SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
           (NR2) {Arabidopsis thaliana}
          Length = 917

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +3

Query: 237 FPREASGGAEWLELSKGTDITEAFESHHLNSSVNKVLEKYYV 362
           F  +  GG++ + ++ GTD TE FE+ H +    K+LE Y +
Sbjct: 573 FLMDHPGGSDSILINAGTDCTEEFEAIH-SDKAKKMLEDYRI 613


>At4g22970.1 68417.m03315 peptidase C50 family protein contains Pfam
            PF03568: Peptidase family C50
          Length = 1773

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 300  EAFESHHLNSSVNKVLEKYYVRGAKTPRNSPFTFEDDG 413
            E  ES  LN+ V+++L   Y+  +    NS FTFE DG
Sbjct: 1160 EVTESGSLNNLVSRLLASLYLLSSS---NSEFTFESDG 1194


>At5g10150.1 68418.m01175 expressed protein
          Length = 414

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +3

Query: 282 KGTDITEAFESHHLN----SSVNKVLEKYYVRGAKTPRNSPFTFEDDGFY 419
           KG++IT+ F+  H+N     S+ +  +   +R    P+N   +F+D   Y
Sbjct: 129 KGSEITDKFQEVHVNRPLSGSIQEAPKSRLLRSKLKPQNRTASFDDAELY 178


>At4g32730.2 68417.m05680 myb family transcription factor identical
           to PC-MYB1 GI:5678826 from [Arabidopsis thaliana];
          Length = 995

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 258 GAEWLELSKGTD-ITEAFESHHLNSSVNKVLEKYYVRG 368
           G +W EL K     ++    +H NSSV K L+ YY  G
Sbjct: 158 GNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYASG 195


>At4g32730.1 68417.m05679 myb family transcription factor identical
           to PC-MYB1 GI:5678826 from [Arabidopsis thaliana];
          Length = 776

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 258 GAEWLELSKGTD-ITEAFESHHLNSSVNKVLEKYYVRG 368
           G +W EL K     ++    +H NSSV K L+ YY  G
Sbjct: 158 GNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYASG 195


>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
           similar to root phototropism RPT2 [Arabidopsis thaliana]
           gi|6959488|gb|AAF33112, a signal transducer of
           phototropic response PMID:10662859
          Length = 607

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 193 EGLWRVHNGIYNFXD-FLEKHP 255
           E  W+ H+G+Y   D FL+ HP
Sbjct: 418 ENAWKCHDGLYRAIDMFLKTHP 439


>At2g32720.1 68415.m04004 cytochrome b5, putative similar to
           Cytochrome B5 SP:P49098 from [Nicotiana tabacum]
          Length = 134

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 AEGLWRVHNG-IYNFXDFLEKHPVG 261
           A   W V NG +YN   FLE HP G
Sbjct: 19  AHDCWIVINGKVYNVTKFLEDHPGG 43


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,750,115
Number of Sequences: 28952
Number of extensions: 204853
Number of successful extensions: 498
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)