Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0929
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    96   3e-22
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.76 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.76 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.76 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.00 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.3  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   7.0  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   7.0  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 95.9 bits (228), Expect = 3e-22
 Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
 Frame = +1

Query: 256 PLSVINIYNPDDVEVIVSTTKHNEKSSVYKFLKPWLGDGLLISKGEKWQQRRKILTPAFH 435
           P  VI + +P DVE+I+S+  + +KS+ Y+F KPWLGDGLLIS G+KW+  RK++ P FH
Sbjct: 87  PKLVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFH 146

Query: 436 FNILRQFSVIIEENSXRLVESWRNDR-KTYRHSTCSIRVYTEFHCETSMGHS 588
            N+L+ F  +   N+  +VE  R +  K +        +  +   ET+MG S
Sbjct: 147 LNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELTVDILLETAMGVS 198



 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/74 (20%), Positives = 33/74 (44%)
 Frame = +2

Query: 29  NKMFVYLIFIASFFLLIHLAFNYNSKAVMMNKVPGPKLSFILGNAPEIMMLSSVELMKLG 208
           + +F+ L+  A     I+   +      +  K+PGP    ++GNA ++         ++ 
Sbjct: 12  SSVFLSLLIPALILYFIYFRISRRHLLELAEKIPGPPALPLIGNALDLFGSPDAMFSQVL 71

Query: 209 RKFASRWDGIYRIW 250
           +K A  +  + +IW
Sbjct: 72  KK-AENFKDVVKIW 84


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 286 DDVEVIVST-TKHNEKSSVYKFLKPWLGD 369
           DD E  VS+ T HNE+S+     KP L D
Sbjct: 248 DDAEESVSSETNHNERSTPRSHAKPSLID 276


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 286 DDVEVIVST-TKHNEKSSVYKFLKPWLGD 369
           DD E  VS+ T HNE+S+     KP L D
Sbjct: 248 DDAEESVSSETNHNERSTPRSHAKPSLID 276


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 286 DDVEVIVST-TKHNEKSSVYKFLKPWLGD 369
           DD E  VS+ T HNE+S+     KP L D
Sbjct: 248 DDAEESVSSETNHNERSTPRSHAKPSLID 276


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +1

Query: 322 NEKSSVYKFLKPWLGDGLLISKGEKWQQRRKILTPAFHFNILRQFSVIIEENSXRL 489
           N    V++  +P L   LL  + E+W+  R  L+P F    L++   +I E S  L
Sbjct: 104 NRGLGVFERTEP-LSPHLLNLEVERWRPLRSRLSPIFTSGKLKEMFYLIIECSLNL 158


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 271 NIYNPDDVEVIVSTTKHN 324
           NI+  D +EVI + TK+N
Sbjct: 11  NIHMSDVIEVIETDTKYN 28


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 271 NIYNPDDVEVIVSTTKHN 324
           NI+  D +EVI + TK+N
Sbjct: 11  NIHMSDVIEVIETDTKYN 28


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 323 LCFVVETITSTSS 285
           +CFV + ITSTS+
Sbjct: 24  ICFVCKDITSTSA 36


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 490 VESWRNDRKTYRHSTCSIR 546
           V SW++   +  HS C+IR
Sbjct: 66  VLSWQSKWLSINHSACAIR 84


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/33 (21%), Positives = 18/33 (54%)
 Frame = -1

Query: 492 HQTXRIFFNYDTELSQDIEVESGRKDFSSLLPF 394
           H+   I +++ ++  +   ++SG  D++   PF
Sbjct: 39  HEWKYIDYDFGSDEKRQAAIQSGEYDYTKNYPF 71


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
 Frame = +1

Query: 268 INIY-NPDDVEVIVSTTKHNEKSSVYKFLKP-WLGDGLLISKGEKWQQRRKILTPAFHFN 441
           +N Y N  D+E  ++  K   K+     ++   +   +L    +K+ +  K+     H +
Sbjct: 306 VNFYPNNQDIEKFLNYLKRGGKTLTSISVESNTMFINILKFLKQKYVKNSKLEKVIKH-D 364

Query: 442 ILRQFSVIIEENSXRLVESWRNDRKTYRHSTCSIRV 549
           ILR   + + +   + +E W N+          IRV
Sbjct: 365 ILRMLIIDLRKKQLKSLEDWENEMNIITKGKPLIRV 400


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,614
Number of Sequences: 438
Number of extensions: 4200
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)