Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0928
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   2.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 539 HELRLTDRRSALGSKMLPASSLV*SLGDKVSRMDKDMSS 423
           H++++ + +  LG   LP  S +   GD  +    DM++
Sbjct: 339 HQIQVLEIKPVLGGTALPDISEIIPTGDDTTMDSNDMTA 377


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 539 HELRLTDRRSALGSKMLPASSLV*SLGDKVSRMDKDMSS 423
           H++++ + +  LG   LP  S +   GD  +    DM++
Sbjct: 339 HQIQVLEIKPVLGGTALPDISEIIPTGDDTTMDSNDMTA 377


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 539 HELRLTDRRSALGSKMLPASSLV*SLGDKVSRMDKDMSS 423
           H++++ + +  LG   LP  S +   GD  +    DM++
Sbjct: 339 HQIQVLEIKPVLGGTALPDISEIIPTGDDTTMDSNDMTA 377


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 539 HELRLTDRRSALGSKMLPASSLV*SLGDKVSRMDKDMSS 423
           H++++ + +  LG   LP  S +   GD  +    DM++
Sbjct: 339 HQIQVLEIKPVLGGTALPDISEIIPTGDDTTMDSNDMTA 377


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 89  IRKRFYSVIGSDKLPT 136
           +R+   SV+G +K+PT
Sbjct: 22  VREEILSVVGKEKIPT 37


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 184 CSLVYAQAFAGRISSGRRQFIRSN 113
           C L+   ++   +SS R +++R+N
Sbjct: 8   CCLLLMFSYTDNVSSTRTKYLRTN 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,948
Number of Sequences: 336
Number of extensions: 2577
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)