Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0928
(630 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55610.1 68416.m06177 delta 1-pyrroline-5-carboxylate synthet... 65 3e-11
At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthet... 63 1e-10
At4g15730.1 68417.m02394 expressed protein 29 1.9
At1g18410.1 68414.m02299 kinesin motor protein-related similar t... 29 3.4
At2g18790.1 68415.m02187 phytochrome B (PHYB) Identical to SP|P1... 28 4.4
At1g50180.1 68414.m05627 disease resistance protein (CC-NBS-LRR ... 28 4.4
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 28 5.9
>At3g55610.1 68416.m06177 delta 1-pyrroline-5-carboxylate synthetase
B / P5CS B (P5CS2) identical to SP|P54888
Length = 726
Score = 65.3 bits (152), Expect = 3e-11
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +1
Query: 232 AKVRQKIGVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSGAVAFGRQK 411
AK ++I VK+G+AV+T + G LALGRL +I EQ+AE + +G E I+V+SGAV GRQ+
Sbjct: 11 AKDVKRIVVKVGTAVVTGKGGR-LALGRLGAICEQLAELNSDGFEVILVSSGAVGLGRQR 69
Query: 412 LTQELLMSLSMRETLSP 462
L L++ S + P
Sbjct: 70 LRYRQLVNSSFADLQKP 86
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 504 EGAAAVGQSELMSMYDAMFSQYNVKIAQVLVTKPDFYNEETR 629
+ A VGQS LM+ Y+ MF Q +V +AQ+LVT F +++ R
Sbjct: 93 KACAGVGQSSLMAYYETMFDQLDVTVAQMLVTDSSFRDKDFR 134
>At2g39800.1 68415.m04888 delta 1-pyrroline-5-carboxylate synthetase
A / P5CS A (P5CS1) identical to SP:P54887:P5C1_ARATH
Length = 717
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +1
Query: 244 QKIGVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSGAVAFGRQKLTQE 423
++I VK+G+AV+T + G LALGRL ++ EQ+AE + +G E I+V+SGAV GRQ+L
Sbjct: 15 KRIVVKVGTAVVTGKGGR-LALGRLGALCEQLAELNSDGFEVILVSSGAVGLGRQRLRYR 73
Query: 424 LLMSLSMRETLSP 462
L++ S + P
Sbjct: 74 QLVNSSFADLQKP 86
>At4g15730.1 68417.m02394 expressed protein
Length = 1059
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 214 GSLLPFSASQCSLVYAQAFAGRISSGRRQFIRSNNAVKTLSD-SISRET*HCFDTIQ 47
G+LLP + SQ + V F G ++ +S NA K ++D S R+ C I+
Sbjct: 969 GNLLPVARSQLNFVPLLDFTGSMNLAMEASAKSQNAFKAVTDTSEERKHGDCISAIK 1025
>At1g18410.1 68414.m02299 kinesin motor protein-related similar to
kinesin-related protein GB:AAF24855 GI:6692749 from
[Arabidopsis thaliana]
Length = 1140
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = -3
Query: 322 KRVDRELVRFHLLS*SQHYLTSHQSSGVL*LRSVSEGSLLPFSASQCSLVYAQAFAGRIS 143
+RVDR V L +QH S + G + S+ S +P+ S+ + + + GR
Sbjct: 863 ERVDRSEVTGDRLKEAQHINKSLSALGDVIFSLASKSSHVPYRNSKLTQLLQSSLGGRAK 922
Query: 142 SGRRQFIRSNNAVKTLSDSIS 80
+ F++ N + + S+S+S
Sbjct: 923 T--LMFVQLNPDITSYSESMS 941
>At2g18790.1 68415.m02187 phytochrome B (PHYB) Identical to
SP|P14713 Phytochrome B {Arabidopsis thaliana}
Length = 1172
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +1
Query: 286 EDGNGLALGRLASIIEQVAECHHEGRECIMVTSGAV------AFGRQKLTQELLMSLSMR 447
+DG+ +A GR + + + CHH CI AFG Q L EL ++L M
Sbjct: 382 DDGSNVASGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQ-LNMELQLALQMS 440
Query: 448 E 450
E
Sbjct: 441 E 441
>At1g50180.1 68414.m05627 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 857
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = +1
Query: 283 REDGNGLALGRLASIIEQVAECHHEGRECIMVTSGAVAFGRQKLTQELLMSLSMRETLSP 462
++ G L RLA I+ + H G E +TS L + S+ RE LS
Sbjct: 87 KQKGMKRVLRRLACILNEAVSLHSVGSEIREITSRLSKIAASMLDFGIKESMG-REGLSL 145
Query: 463 SDHTREDAGS 492
SD RE S
Sbjct: 146 SDSLREQRQS 155
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = -3
Query: 322 KRVDRELVRFHLLS*SQHYLTSHQSSGVL*LRSVSEGSLLPFSASQCSLVYAQAFAGRIS 143
+RVDR V L +QH S S G + S+ S +P+ S+ + + + GR
Sbjct: 754 ERVDRSEVTGDRLREAQHINKSLSSLGDVIFSLASKSSHVPYRNSKLTQLLQTSLGGRAK 813
Query: 142 SGRRQFIRSNNAVKTLSDSIS 80
+ F++ N + S+S+S
Sbjct: 814 T--LMFVQLNPDATSYSESMS 832
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,607,075
Number of Sequences: 28952
Number of extensions: 241600
Number of successful extensions: 507
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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