Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0927
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    27   0.38 
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   1.5  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   1.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   2.7  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   2.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.5  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    24   4.7  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   6.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.2  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   8.2  

>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = -3

Query: 225 CKVFTRPPSISGALVMSDTS*TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETL 46
           C+V   PP+++     + T+ T   A  S        +NC+ +  RLF + +  V     
Sbjct: 286 CEVAVEPPAMTTTTTTTTTTPTTATACPSTTEFNYKELNCQ-NCGRLFISNNGRVSCCRC 344

Query: 45  RRASFPFDAMF 13
            ++S PF   F
Sbjct: 345 MKSSTPFGKFF 355


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -3

Query: 162 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
           TVR + RS   VPP          R+F+NE   +  E     +F  +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 208


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -3

Query: 162 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
           TVR + RS   VPP          R+F+NE   +  E     +F  +AM C
Sbjct: 165 TVRRSSRSTKGVPPQRFRETTGMVRIFSNERILITQEYCEPRTFE-EAMSC 214


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -3

Query: 162 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
           TVR + RS   VPP          R+F NE   +  E     +F  +AM C
Sbjct: 389 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 438


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -3

Query: 162 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPFDAMFC 10
           TVR + RS   VPP          R+F NE   +  E     +F  +AM C
Sbjct: 159 TVRRSSRSTKGVPPQRFRETTGMVRIFLNERILITQEYCEPRTFE-EAMSC 208


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 67  STLVSKESVGMWP-AVDRQWRYRHGASERRPDSSRCV 174
           S  + +    +W  A DRQW  R  AS +RP + R V
Sbjct: 787 SEAIIRYGAPIWAEATDRQWCQRMLASFQRPLAQRVV 823



 Score = 23.8 bits (49), Expect = 4.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 162 TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRA 37
           T RPA+    A+  L   CR    R  A+ + P +S   R+A
Sbjct: 290 TGRPAYWCTPAIEELENECRIAEQRQLASPTDPDISALDRQA 331


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 496 RTNITDVFRHKAEISPEXVH 555
           R NITDV +  + I+ E VH
Sbjct: 333 RQNITDVMKQHSSITYEAVH 352


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -1

Query: 134 WRYRHWRSTAGHIPTDSLLTRVDPFCPKR*EELVFHLT 21
           W+ R W +T     T  L+  + P+  +R   + FH++
Sbjct: 859 WQ-REWSTTTSGSWTRRLIPNIQPWITRRHGNIEFHMS 895


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 221 LHPAVHAGILAHYQ 262
           LHPA H G+  +YQ
Sbjct: 188 LHPAYHTGLHHYYQ 201


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 221 LHPAVHAGILAHYQ 262
           LHPA H G+  +YQ
Sbjct: 188 LHPAYHTGLHHYYQ 201


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 248  LAHYQTLTRKT*NVRSTR 301
            L H  TL+RKT NV  TR
Sbjct: 1103 LGHRLTLSRKTLNVLDTR 1120


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 173 THLELSGRRSEAPWRYRHWRSTAGHI 96
           THLE +G  S+  + +R  RST   I
Sbjct: 513 THLESTGGLSDPQYGFRKGRSTVDAI 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,867
Number of Sequences: 2352
Number of extensions: 11763
Number of successful extensions: 37
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)