Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0926
         (596 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q057U9 Cluster: GTP-binding protein; n=1; Buchnera aphi...    37   0.41 
UniRef50_Q8IKF1 Cluster: Putative uncharacterized protein; n=1; ...    36   0.72 
UniRef50_Q24D39 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_Q976Q0 Cluster: Putative uncharacterized protein ST0140...    34   2.2  
UniRef50_A6LFD5 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  

>UniRef50_Q057U9 Cluster: GTP-binding protein; n=1; Buchnera
           aphidicola str. Cc (Cinara cedri)|Rep: GTP-binding
           protein - Buchnera aphidicola subsp. Cinara cedri
          Length = 347

 Score = 36.7 bits (81), Expect = 0.41
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
 Frame = +2

Query: 56  DLAEFVFSLSPRSSGSRDALSILSLSLVLNCIFSLWP*RICRELNFTINA*RSFTS-KFF 232
           +L E +F     ++  +++   + L+L+  CI  L    I R+LNFT N  +     +F 
Sbjct: 138 NLCEKIFKKKSINNKIKNSNQYVFLNLIKYCIKKLQQGYILRDLNFTQNELKILKQYRFL 197

Query: 233 SYSPFCTSI-VFNEVDDLMSSYIFITNNTYIELYYAVISVQ 352
           +  P      + N++   ++  IF+ NN +I+  +  IS++
Sbjct: 198 TLKPMIYVFNISNDITHNINLNIFLKNNNFIKSNFISISIE 238


>UniRef50_Q8IKF1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1837

 Score = 35.9 bits (79), Expect = 0.72
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +2

Query: 290 SYIFITNNTYIELYYAVISVQFRMCILFACSN 385
           S+I+I  +TY+ELYY  +   F  CIL  CSN
Sbjct: 516 SFIYIIQDTYVELYYNFLKYLFARCIL--CSN 545


>UniRef50_Q24D39 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1323

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 24/63 (38%), Positives = 31/63 (49%)
 Frame = -1

Query: 542 EETLNKQNQTNPQLHSSRSRQKVPLDTRVLDILAVYPRFXRYNNQILYTQNQYWNMQIKY 363
           EE  NK+N   PQ+H  RS+  +  D ++ D+L  Y    R NN      NQ      KY
Sbjct: 763 EEEANKENTFKPQIH-QRSK-SIKRDEKIQDLL--YKDAVRRNNIQQNISNQKPRSSSKY 818

Query: 362 TSE 354
           TSE
Sbjct: 819 TSE 821


>UniRef50_Q976Q0 Cluster: Putative uncharacterized protein ST0140;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST0140 - Sulfolobus tokodaii
          Length = 767

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +2

Query: 41  VYKRNDLAEFVFSLSPR-SSGSRDALSILSLSLVLNCIFSLWP*RICRELNFTINA*RSF 217
           VY R+     + S     ++G  + L I+  S +   IFSLWP  I  +L++       F
Sbjct: 33  VYVRDSYPSIIGSFPTLVNNGQINLLFIMDTSDLPIYIFSLWP-EIWDKLSYAYPIFLGF 91

Query: 218 TSKFFSYSPFCTSIVFNEVDDLMSSYIFITNNTYIELYY 334
            S +F+ S +   I + E+  L+ +++++T+  ++   Y
Sbjct: 92  VSMYFA-SYYILRIRYKEIISLIVAFLYVTSPAFMYFTY 129


>UniRef50_A6LFD5 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 368

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 188 NFTINA*RSFTSKFFSYSPFCTSIVFNEVDDLMSSYIFITNNTYIELY 331
           ++TIN      + + S S  C   V+N V DL S+Y F+ N   +  Y
Sbjct: 234 SYTINEQTHKNATYLSESKTCNVEVYNGVSDLPSTYSFVDNKNLLSFY 281


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,269,415
Number of Sequences: 1657284
Number of extensions: 9675607
Number of successful extensions: 24127
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24090
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)