Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0926
         (596 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013876-1|AAY26238.1|  432|Homo sapiens cAMP regulatory element...    30   5.4  
AK001925-1|BAA91981.1|  432|Homo sapiens protein ( Homo sapiens ...    30   5.4  
AB034205-1|BAA90542.1|  432|Homo sapiens cisplatin resistance-as...    30   5.4  

>DQ013876-1|AAY26238.1|  432|Homo sapiens cAMP regulatory element
           associated protein 1 protein.
          Length = 432

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -3

Query: 159 REKIQFRTSESERIDRASREPLDRGEREK 73
           +EK++ RT E +R +R  +E  +R EREK
Sbjct: 231 KEKLRKRTEEPDRDERLKKEKQEREEREK 259


>AK001925-1|BAA91981.1|  432|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11063 fis, clone PLACE1004814, weakly similar to
           SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
          Length = 432

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -3

Query: 159 REKIQFRTSESERIDRASREPLDRGEREK 73
           +EK++ RT E +R +R  +E  +R EREK
Sbjct: 231 KEKLRKRTEEPDRDERLKKEKQEREEREK 259


>AB034205-1|BAA90542.1|  432|Homo sapiens cisplatin
           resistance-associated overexpressed protein protein.
          Length = 432

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -3

Query: 159 REKIQFRTSESERIDRASREPLDRGEREK 73
           +EK++ RT E +R +R  +E  +R EREK
Sbjct: 231 KEKLRKRTEEPDRDERLKKEKQEREEREK 259


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,973,548
Number of Sequences: 237096
Number of extensions: 1441168
Number of successful extensions: 2164
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2164
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)