BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0925
(639 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 25 0.70
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.70
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.70
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.70
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.70
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.70
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.70
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.70
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.70
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.70
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 2.1
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 2.1
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 23 2.1
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 5.0
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 5.0
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 6.6
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 6.6
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 21 6.6
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 6.6
AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical pro... 21 6.6
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 6.6
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 6.6
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 24.6 bits (51), Expect = 0.70
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 397 AEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFRTMTSPYRTTS 576
A P+ TTG + + M +K + W+ SP + R T+ TT+
Sbjct: 1013 APPQVTTGVDTGASSTEHMHPDWTTKPST----WWSSTTTSPWWTTTTTRRTTTTRPTTT 1068
Query: 577 ASNTRPGKPN*P 612
++ TRP N P
Sbjct: 1069 STTTRPTTTNWP 1080
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 80 RSTPPLSTPSNSNATKSSGL 99
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.70
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGL 330
R TPP+S S ++AT +SGL
Sbjct: 124 RSTPPLSTPSNSNATKSSGL 143
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 95 ASGGTATALRNAGLTVQDVSD 157
+S TATA+ +A +T+Q+VS+
Sbjct: 251 SSPTTATAIASATVTIQNVSN 271
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 95 ASGGTATALRNAGLTVQDVSD 157
+S TATA+ +A +T+Q+VS+
Sbjct: 199 SSPTTATAIASATVTIQNVSN 219
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 95 ASGGTATALRNAGLTVQDVSD 157
+S TATA+ +A +T+Q+VS+
Sbjct: 382 SSPTTATAIASATVTIQNVSN 402
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 606 VGLARASIACGSSPIW 559
V L+ S+ CGS+ +W
Sbjct: 77 VSLSTCSMLCGSTQLW 92
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 5.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 490 RRLWAQAEISPEGVHSYFRTMTSPYRTTSASN 585
+ L +E+S G FRTM + SASN
Sbjct: 326 KALEKMSELSKLGGEDLFRTMANAAPGNSASN 357
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 555 LAISDYFRKQYSPGQAQLTLRYGM 626
L I Y + Y P QA T YG+
Sbjct: 424 LGILRYAKGPYQPSQAPPTYDYGI 447
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 555 LAISDYFRKQYSPGQAQLTLRYGM 626
L I Y + Y P QA T YG+
Sbjct: 424 LGILRYAKGPYQPSQAPPTYDYGI 447
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 515 ISACAQSRLMMFVLFDFFDYSIVVGR 438
+S+ Q+ + + LFD DYS + R
Sbjct: 102 LSSATQASIEIDSLFDGIDYSTTITR 127
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 515 ISACAQSRLMMFVLFDFFDYSIVVGR 438
+S+ Q+ + + LFD DYS + R
Sbjct: 102 LSSATQASIEIDSLFDGIDYSTTITR 127
>AM712905-1|CAN84644.1| 102|Tribolium castaneum hypothetical
protein protein.
Length = 102
Score = 21.4 bits (43), Expect = 6.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 389 RVTPPMSMFSTASATVTSGLDTVWTNGYRLQTTTLIISYF*RFMSPGQSRIIEL 228
R+ P+S T + + ++ +T+G+ L +++L + F R Q RI L
Sbjct: 4 RICIPISSGRTNGSNFSKFINCHYTSGHLLGSSSLPLRSFYRSRIRYQGRISSL 57
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 377 PMSMFSTASATVTSGLDTVWTN 312
P++ S ASA S LD W +
Sbjct: 359 PLTSLSLASAQTLSELDLSWNS 380
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.4 bits (43), Expect = 6.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 171 GALVMSDTS*TVRPAFRSAVAVPPLAINCRPHSDRLFANESRP 43
G +V TS V A ++ PLA CR + + A S P
Sbjct: 223 GRIVERFTSDRVHAALVTSPRARPLARTCRDNRLLVLAGTSSP 265
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,505
Number of Sequences: 336
Number of extensions: 2786
Number of successful extensions: 24
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -