Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0925
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 6e-28
SB_57127| Best HMM Match : MGS (HMM E-Value=0.25) 70 2e-12
SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 30 1.4
SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) 30 1.8
SB_22988| Best HMM Match : RVT_1 (HMM E-Value=5.70328e-43) 29 3.2
SB_24434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_26612| Best HMM Match : NC (HMM E-Value=6.7) 29 4.2
SB_49126| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_50503| Best HMM Match : DUF1661 (HMM E-Value=5.8) 27 9.7
SB_49489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 27 9.7
SB_25530| Best HMM Match : DUF1661 (HMM E-Value=5.8) 27 9.7
SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92) 27 9.7
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_47644| Best HMM Match : Ldh_1_C (HMM E-Value=4.8) 27 9.7
SB_42065| Best HMM Match : DUF1661 (HMM E-Value=5.8) 27 9.7
SB_14380| Best HMM Match : DUF1661 (HMM E-Value=5.8) 27 9.7
>SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 121 bits (291), Expect = 6e-28
Identities = 57/82 (69%), Positives = 69/82 (84%)
Frame = +2
Query: 8 GKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITXAPEMLGG 187
G LALLSVS+K GL+ AK L + G +L+ASGGTA A+RNAG+ V+DVS+IT APEMLGG
Sbjct: 33 GSLALLSVSNKKGLVEFAKQLHDLGFRLVASGGTANAIRNAGIPVRDVSEITGAPEMLGG 92
Query: 188 RVKTLHPAVHAGILARLSDSDQ 253
RVKTLHPAVH GILAR+S+ D+
Sbjct: 93 RVKTLHPAVHGGILARVSEGDK 114
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/78 (51%), Positives = 52/78 (66%)
Frame = +3
Query: 405 KNHDRVTVVCDPADYDAVVKEIKENKHHQTTLGTSRD*P*RRSLILSDYDLAISDYFRKQ 584
KNH+RVTVVCDP DY+ V+ E+ EN+ T T + + + YD+AISDYFRK+
Sbjct: 166 KNHERVTVVCDPEDYNKVLSEMTENETCDTLPDTRKTLALKAFSHTASYDMAISDYFRKE 225
Query: 585 YSPGQAQLTLRYGMNPHQ 638
YS + + LRYGMNPHQ
Sbjct: 226 YSENVSHIPLRYGMNPHQ 243
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +1
Query: 256 DMKRQKYEMXSVVVCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRA 399
DM +Q +E VVVCNLYPFV TV+K V V++AVE IDIGGVTLLRA
Sbjct: 116 DMAKQGFEYIRVVVCNLYPFVNTVAKEGVIVSEAVEQIDIGGVTLLRA 163
>SB_57127| Best HMM Match : MGS (HMM E-Value=0.25)
Length = 79
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +1
Query: 256 DMKRQKYEMXSVVVCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRA 399
DM +Q +E VVVCNLYPFV TV+K V V++AVE IDIGGVTLLRA
Sbjct: 13 DMAKQGFEYIRVVVCNLYPFVNTVAKEGVIVSEAVEQIDIGGVTLLRA 60
Score = 35.5 bits (78), Expect = 0.037
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 405 KNHDRVTVVCDPADYD 452
KNH+RVTVVCDP DY+
Sbjct: 63 KNHERVTVVCDPEDYN 78
>SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 645
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 1 GKWKTSSSQRFRQDGSTLVSKEP 69
G+W T ++R+R+DGS ++ EP
Sbjct: 333 GQWHTVVAERYRRDGSLILDSEP 355
>SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)
Length = 1706
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 414 DRVTVVCDPADYDAVVKEIKE-NKHHQTTL 500
D + CDPA+ +A++ I+E N+HHQ L
Sbjct: 1447 DGILRTCDPAELEALLMLIEEQNEHHQKVL 1476
>SB_22988| Best HMM Match : RVT_1 (HMM E-Value=5.70328e-43)
Length = 1029
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/75 (21%), Positives = 29/75 (38%)
Frame = +1
Query: 343 TVADAVENIDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISP 522
T+ +D+ G+ L + + T +KK + IIR +W E P
Sbjct: 240 TLCKQTNQVDVDGLPLENFVDDNLNDDDDTEAQKTPRSKTKKRAKARIIRSVWFNKEAEP 299
Query: 523 EGVHSYFRTMTSPYR 567
E + + +P+R
Sbjct: 300 EKHYRELLMLFTPWR 314
>SB_24434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1194
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 158 CPTHLEL*GRRSEAPWRYRHWQSTAGHIPTGSLLTRVDPSCLK 30
CP + + R+ + Y W+ TG+L+TR++PS +K
Sbjct: 447 CPNDITITTARNNSKAAYVTWKPPQAVDNTGNLVTRIEPSEIK 489
>SB_26612| Best HMM Match : NC (HMM E-Value=6.7)
Length = 451
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 488 MMFVLFDFFDYSIVVGRVTDDGDPVVVLGSARRRVTPPMSMFSTASAT---VTSGLDTVW 318
+ V+ + S+ R+T D V R+TP M TAS T +T +DTV+
Sbjct: 133 LTLVMDTVYTASVTFYRLTPVMDTVYTASVTFYRLTPVMDTVYTASVTFYRLTPVMDTVY 192
Query: 317 TNGYRLQTTTLII 279
T TL++
Sbjct: 193 TASVTFYRLTLVM 205
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -2
Query: 479 VLFDFFDYSIVVGRVTDDGDPVVVLGSARRRVTPPMSMFSTASAT---VTSGLDTVWTNG 309
V+ + S+ RVT D V R+TP M TAS T +T +DTV+T
Sbjct: 68 VMDTVYTASVTFYRVTLVMDTVYTASVTFYRLTPVMDTVYTASVTFYRLTPVMDTVYTAS 127
Query: 308 YRLQTTTLII 279
TL++
Sbjct: 128 VTFYRLTLVM 137
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -2
Query: 488 MMFVLFDFFDYSIVVGRVTDDGDPVVVLGSARRRVTPPMSMFSTASAT---VTSGLDTVW 318
+ V+ + S+ R+T D V R+TP M TAS T VT +DTV+
Sbjct: 269 LTLVMDTVYTASVTFYRLTLVMDTVYTASVTFYRLTPVMDTVYTASVTFFRVTLVMDTVY 328
Query: 317 TNGYRLQTTTLIIS 276
T TL+++
Sbjct: 329 TASVTFFRVTLVMN 342
>SB_49126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 473 FDFFDYSIVVGRVTDDGDPVVVL 405
FDF D+SI+V ++T PVV++
Sbjct: 294 FDFIDHSILVDKLTYQARPVVIV 316
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 364 NIDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRL 498
N D+ + P PSS TR T +KK R+N+++++
Sbjct: 377 NWDLNPTDHTQFVPSKAAAKPSSPTRTTQQYHTKKGHRSNVVQKV 421
>SB_50503| Best HMM Match : DUF1661 (HMM E-Value=5.8)
Length = 533
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 367 IDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFR 546
+D+ G+ L + + T +KK + IIR +W E PE +
Sbjct: 459 VDVDGLPLENFVDDNLNDDDDTEAQKTPRSKTKKRAKARIIRSVWFNKEAEPEKHYRELL 518
Query: 547 TMTSPYR 567
+ +P+R
Sbjct: 519 MLFTPWR 525
>SB_49489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 517 SPEGVHSYFRTMTSPYRTTSASNTR 591
SP G Y +SPY TT + TR
Sbjct: 293 SPPGAGGYHSAFSSPYATTQVTGTR 317
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 295 VCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRAEPRTTTGSPSSVTRPTTM 453
+C+ +V P V + I VT PRTT P+S + P TM
Sbjct: 1446 ICSFVKYVAQFGAPPVQPLSGPQRASISRVT-----PRTTPDKPTSSSTPVTM 1493
>SB_25530| Best HMM Match : DUF1661 (HMM E-Value=5.8)
Length = 160
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 367 IDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFR 546
+D+ G+ L + + T +KK + IIR +W E PE +
Sbjct: 49 VDVDGLPLENFVDDNLNDDDDTEAQKTPRSKTKKRAKARIIRSVWFNKEAEPEKHYRELL 108
Query: 547 TMTSPYR 567
+ +P+R
Sbjct: 109 MLFTPWR 115
>SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1867
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 367 IDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFR 546
+D+ G+ L + + T +KK + IIR +W E PE +
Sbjct: 1089 VDVDGLPLENFVDDNLNDDDDTKAQKTPRSKTKKRAKARIIRSVWFNKEAEPEKHYRELL 1148
Query: 547 TMTSPYR 567
+ +P+R
Sbjct: 1149 MLFTPWR 1155
>SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92)
Length = 1100
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 367 IDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFR 546
+D+ G+ L + + T +KK + IIR +W E PE +
Sbjct: 749 VDVDGLPLENFVDDNLNDDDDTEAQKTPRSKTKKRAKARIIRSVWFNKEAEPEKHYRELL 808
Query: 547 TMTSPYR 567
+ +P+R
Sbjct: 809 MLFTPWR 815
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 319 QTVSKPDVTVADAVENIDIGGVTLLRAEPRTTTGSPSSVTRPTT 450
+T P+ T +I GV+ A P TT+G P + T P T
Sbjct: 2571 ETTFVPETTAVPETTGSEITGVSETTAVPETTSG-PMTTTGPET 2613
>SB_47644| Best HMM Match : Ldh_1_C (HMM E-Value=4.8)
Length = 243
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 367 IDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFR 546
+D+ G+ L + + T +KK + IIR +W E PE +
Sbjct: 56 VDVDGLPLENFVDDNLNDDDDTEAQKTPRSKTKKRAKARIIRSVWFNKEAEPEKHYRELL 115
Query: 547 TMTSPYR 567
+ +P+R
Sbjct: 116 MLFTPWR 122
>SB_42065| Best HMM Match : DUF1661 (HMM E-Value=5.8)
Length = 234
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 367 IDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFR 546
+D+ G+ L + + T +KK + IIR +W E PE +
Sbjct: 56 VDVDGLPLENFVDDNLNDDDDTEAQKTPRSKTKKRAKARIIRSVWFNKEAEPEKHYRELL 115
Query: 547 TMTSPYR 567
+ +P+R
Sbjct: 116 MLFTPWR 122
>SB_14380| Best HMM Match : DUF1661 (HMM E-Value=5.8)
Length = 384
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/67 (22%), Positives = 27/67 (40%)
Frame = +1
Query: 367 IDIGGVTLLRAEPRTTTGSPSSVTRPTTML*SKKSKRTNIIRRLWAQAEISPEGVHSYFR 546
+D+ G+ L + + T +KK + IIR +W E PE +
Sbjct: 248 VDVDGLPLENFVDDNLNDDDDTEAQKTPRSKTKKRAKARIIRSVWFNKEAEPEKHYRELL 307
Query: 547 TMTSPYR 567
+ +P+R
Sbjct: 308 MLFTPWR 314
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,207,347
Number of Sequences: 59808
Number of extensions: 387446
Number of successful extensions: 1131
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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