Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0924
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 41 8e-04
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 33 0.16
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69787-5|CAA93641.1| 129|Caenorhabditis elegans Hypothetical pr... 29 3.5
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 3.5
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 3.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 6.1
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 6.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 6.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 6.1
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 6.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 6.1
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +3
Query: 252 PVTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDR 431
P+ + +AF+AGSRYE + GLSH +R+ G T+ + LSQ G + + R
Sbjct: 41 PIAHLVLAFRAGSRYEKANQAGLSHTIRNFVGRDTQEYFGNTVVWTLSQTGGVLKSFTSR 100
Query: 432 EFIYYTLEATQDKLNDALEILNNL 503
+ +L ++ + L +L +
Sbjct: 101 DLFGVSLTIPRESTSVGLSVLGQV 124
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/80 (27%), Positives = 43/80 (53%)
Frame = +3
Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
+ +AF+AGSRY+P + GL+H++R++ G N + +Q G ++A +R+ +
Sbjct: 62 IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 121
Query: 444 YTLEATQDKLNDALEILNNL 503
+ +D+ L +L L
Sbjct: 122 IEVNVVRDQSAVVLSLLGQL 141
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/80 (27%), Positives = 43/80 (53%)
Frame = +3
Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
+ +AF+AGSRY+P + GL+H++R++ G N + +Q G ++A +R+ +
Sbjct: 48 IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 107
Query: 444 YTLEATQDKLNDALEILNNL 503
+ +D+ L +L L
Sbjct: 108 IEVNVVRDQSAVVLSLLGQL 127
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/80 (27%), Positives = 43/80 (53%)
Frame = +3
Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
+ +AF+AGSRY+P + GL+H++R++ G N + +Q G ++A +R+ +
Sbjct: 62 IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 121
Query: 444 YTLEATQDKLNDALEILNNL 503
+ +D+ L +L L
Sbjct: 122 IEVNVVRDQSAVVLSLLGQL 141
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/80 (27%), Positives = 43/80 (53%)
Frame = +3
Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
+ +AF+AGSRY+P + GL+H++R++ G N + +Q G ++A +R+ +
Sbjct: 48 IVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLA 107
Query: 444 YTLEATQDKLNDALEILNNL 503
+ +D+ L +L L
Sbjct: 108 IEVNVVRDQSAVVLSLLGQL 127
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/85 (27%), Positives = 45/85 (52%)
Frame = +3
Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
+ + AGSRYE + G +H L A T + ++ ++ IGA+++A RE
Sbjct: 53 IGVFIDAGSRYENEKNNGTAHFLEHMAFKGTPRRTRMGLELEVENIGAHLNAYTSRESTT 112
Query: 444 YTLEATQDKLNDALEILNNLVSTKS 518
Y + +KL+ +++IL++++ S
Sbjct: 113 YYAKCFTEKLDQSVDILSDILLNSS 137
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/85 (24%), Positives = 44/85 (51%)
Frame = +3
Query: 255 VTRVTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRE 434
++++ +AF+AGSRYE + GL H +R+ G ++ + + GA +++ R+
Sbjct: 41 ISQLILAFRAGSRYEKVTQPGLVHHVRNFVGRDAQSYPGLQLVWSSAASGANLNSFATRD 100
Query: 435 FIYYTLEATQDKLNDALEILNNLVS 509
+ +D+ AL IL ++ +
Sbjct: 101 IFGVQISVARDQAAYALSILGHVAA 125
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISS-FLIQRKLSQIGAYVSASGDREFI 440
V +A ++G RYE G+S ++ A ++++ SS + KL + V R+ +
Sbjct: 42 VGVAIESGCRYENGFPFGISRIVEKLAYNSSESFSSRDEVFAKLEENSGIVDCQSTRDTM 101
Query: 441 YYTLEATQDKLNDALEILNNLV 506
Y +D ++ + +L++ +
Sbjct: 102 MYAASCHRDGVDSVIHVLSDTI 123
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/81 (22%), Positives = 42/81 (51%)
Frame = +3
Query: 264 VTIAFKAGSRYEPQAELGLSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDREFIY 443
V + + GSR+E + G++H L T +S ++ +L+ IGA +++ +R+
Sbjct: 61 VGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTA 120
Query: 444 YTLEATQDKLNDALEILNNLV 506
++A + ++IL +++
Sbjct: 121 VFVQAGAQDVEKVVDILADVL 141
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
R09E10.7 protein.
Length = 1717
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 51 NHKPLLRYYLKFLKTYENGIQNSRRPLYSSCYDQGLRPSCAGSKERC 191
NH Y+L+ TY+ Q +RP++ DQ P + RC
Sbjct: 1006 NHLSNAAYFLERCPTYQRRFQPGQRPVFPYRDDQAQEPVPESAPNRC 1052
>Z69787-5|CAA93641.1| 129|Caenorhabditis elegans Hypothetical
protein C44C10.6 protein.
Length = 129
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 562 IFQTRSIIIEFPWSELLVETKLFRISSASFNLSCVASK 449
+F T + ++EFP S + TK+FR +A + C+ +
Sbjct: 59 LFSTSNFVLEFPHSVSMFLTKVFRRVAAIESKKCIVGE 96
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 74 LPKVSKNLRKWHPKLSSPPLFVMLRSGATPKLR-RQ*RKMLGSNQVF 211
LP + K L +W+ K ML ATP+LR + +K+L N +F
Sbjct: 113 LPPILKVLVEWYEKYDESLCLSMLSPIATPELRLKLHKKLLAVNYLF 159
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 74 LPKVSKNLRKWHPKLSSPPLFVMLRSGATPKLR-RQ*RKMLGSNQVF 211
LP + K L +W+ K ML ATP+LR + +K+L N +F
Sbjct: 113 LPPILKVLVEWYEKYDESLCLSMLSPIATPELRLKLHKKLLAVNYLF 159
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 428 QRIHILHFGSNTGQIE*CTGDPE*LSFNQEFRPWELNDNAPRLKY 562
QR+H L F +N Q TG + + F+ WE D P+L+Y
Sbjct: 325 QRVHDLEFTNNLKQHPGDTGKLGRIIRHDAFQVWE-GDEPPKLRY 368
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 428 QRIHILHFGSNTGQIE*CTGDPE*LSFNQEFRPWELNDNAPRLKY 562
QR+H L F +N Q TG + + F+ WE D P+L+Y
Sbjct: 325 QRVHDLEFTNNLKQHPGDTGKLGRIIRHDAFQVWE-GDEPPKLRY 368
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 428 QRIHILHFGSNTGQIE*CTGDPE*LSFNQEFRPWELNDNAPRLKY 562
QR+H L F +N Q TG + + F+ WE D P+L+Y
Sbjct: 325 QRVHDLEFTNNLKQHPGDTGKLGRIIRHDAFQVWE-GDEPPKLRY 368
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 428 QRIHILHFGSNTGQIE*CTGDPE*LSFNQEFRPWELNDNAPRLKY 562
QR+H L F +N Q TG + + F+ WE D P+L+Y
Sbjct: 325 QRVHDLEFTNNLKQHPGDTGKLGRIIRHDAFQVWE-GDEPPKLRY 368
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 428 QRIHILHFGSNTGQIE*CTGDPE*LSFNQEFRPWELNDNAPRLKY 562
QR+H L F +N Q TG + + F+ WE D P+L+Y
Sbjct: 325 QRVHDLEFTNNLKQHPGDTGKLGRIIRHDAFQVWE-GDEPPKLRY 368
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 428 QRIHILHFGSNTGQIE*CTGDPE*LSFNQEFRPWELNDNAPRLKY 562
QR+H L F +N Q TG + + F+ WE D P+L+Y
Sbjct: 325 QRVHDLEFTNNLKQHPGDTGKLGRIIRHDAFQVWE-GDEPPKLRY 368
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,678,758
Number of Sequences: 27780
Number of extensions: 278509
Number of successful extensions: 673
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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