Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0923
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 147 2e-35
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 147 2e-35
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 147 2e-35
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 147 2e-35
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 144 2e-34
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 88 2e-17
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 55 2e-07
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 147 bits (357), Expect = 2e-35
Identities = 88/200 (44%), Positives = 109/200 (54%), Gaps = 2/200 (1%)
Frame = +1
Query: 16 VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
V+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIR
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRV 87
Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
L P P G + ++ +
Sbjct: 88 VRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIR 147
Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*R-XEKRXH*MLSV**HX 549
+ F+VR GMRAVEFK VETDPSP+ IV PD VIHC+GE I R E+ +
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIG 207
Query: 550 RXSQXXGAI*EMVELPLRYP 609
+ I EMVELPLR+P
Sbjct: 208 GCRKQLAQIKEMVELPLRHP 227
Score = 64.5 bits (150), Expect = 3e-10
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3
Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
VKY KR+H+LPIDD+V G+TGNLF YLKPYF+EA
Sbjct: 108 VKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEA 142
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 147 bits (357), Expect = 2e-35
Identities = 88/200 (44%), Positives = 109/200 (54%), Gaps = 2/200 (1%)
Frame = +1
Query: 16 VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
V+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIR
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRV 87
Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
L P P G + ++ +
Sbjct: 88 VRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIR 147
Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*R-XEKRXH*MLSV**HX 549
+ F+VR GMRAVEFK VETDPSP+ IV PD VIHC+GE I R E+ +
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIG 207
Query: 550 RXSQXXGAI*EMVELPLRYP 609
+ I EMVELPLR+P
Sbjct: 208 GCRKQLAQIKEMVELPLRHP 227
Score = 64.5 bits (150), Expect = 3e-10
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3
Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
VKY KR+H+LPIDD+V G+TGNLF YLKPYF+EA
Sbjct: 108 VKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEA 142
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 147 bits (357), Expect = 2e-35
Identities = 88/200 (44%), Positives = 109/200 (54%), Gaps = 2/200 (1%)
Frame = +1
Query: 16 VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
V+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIR
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRV 87
Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
L P P G + ++ +
Sbjct: 88 VRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIR 147
Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*R-XEKRXH*MLSV**HX 549
+ F+VR GMRAVEFK VETDPSP+ IV PD VIHC+GE I R E+ +
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIG 207
Query: 550 RXSQXXGAI*EMVELPLRYP 609
+ I EMVELPLR+P
Sbjct: 208 GCRKQLAQIKEMVELPLRHP 227
Score = 64.5 bits (150), Expect = 3e-10
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3
Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
VKY KR+H+LPIDD+V G+TGNLF YLKPYF+EA
Sbjct: 108 VKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEA 142
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 147 bits (357), Expect = 2e-35
Identities = 88/200 (44%), Positives = 109/200 (54%), Gaps = 2/200 (1%)
Frame = +1
Query: 16 VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
V+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIR
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRV 87
Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
L P P G + ++ +
Sbjct: 88 VRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIR 147
Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*R-XEKRXH*MLSV**HX 549
+ F+VR GMRAVEFK VETDPSP+ IV PD VIHC+GE I R E+ +
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIG 207
Query: 550 RXSQXXGAI*EMVELPLRYP 609
+ I EMVELPLR+P
Sbjct: 208 GCRKQLAQIKEMVELPLRHP 227
Score = 64.5 bits (150), Expect = 3e-10
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3
Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
VKY KR+H+LPIDD+V G+TGNLF YLKPYF+EA
Sbjct: 108 VKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEA 142
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 144 bits (350), Expect = 2e-34
Identities = 87/200 (43%), Positives = 108/200 (54%), Gaps = 2/200 (1%)
Frame = +1
Query: 16 VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
V+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIR
Sbjct: 28 VDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRV 87
Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
L P P G + ++ +
Sbjct: 88 VRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIR 147
Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*R-XEKRXH*MLSV**HX 549
+ F+VR GMRAVEFK VET PSP+ IV PD VIHC+GE I R E+ +
Sbjct: 148 KGDIFLVRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIG 207
Query: 550 RXSQXXGAI*EMVELPLRYP 609
+ I EMVELPLR+P
Sbjct: 208 GCRKQLAQIKEMVELPLRHP 227
Score = 64.5 bits (150), Expect = 3e-10
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3
Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
VKY KR+H+LPIDD+V G+TGNLF YLKPYF+EA
Sbjct: 108 VKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEA 142
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 88.2 bits (209), Expect = 2e-17
Identities = 60/163 (36%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Frame = +1
Query: 127 KETVCIVLSDDNCPDEKIRXXXXXXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXX 306
+E VCIVLSDD C DEKIR L P P G +
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 307 XXXA-IYSXXT*SRTSWRLPSVHRDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHC 483
++ + + F+VR GMRAVEFK VETDPSP+ IV PD VIHC
Sbjct: 63 GITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHC 122
Query: 484 DGEXI*R-XEKRXH*MLSV**HXRXSQXXGAI*EMVELPLRYP 609
+GE I R E+ + + I EMVELPLR+P
Sbjct: 123 EGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHP 165
Score = 64.5 bits (150), Expect = 3e-10
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3
Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
VKY KR+H+LPIDD+V G+TGNLF YLKPYF+EA
Sbjct: 46 VKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEA 80
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 54.8 bits (126), Expect = 2e-07
Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 418 FKXVETDPSPFXIVXPDNVIHCDGEXI*R-XEKRXH*MLSV**HXRXSQXXGAI*EMVEL 594
FK VETDPSP+ IV PD VIHC+GE I R E+ + + I EMVEL
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVEL 60
Query: 595 PLRYP 609
PLR+P
Sbjct: 61 PLRHP 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,508,862
Number of Sequences: 237096
Number of extensions: 988000
Number of successful extensions: 1572
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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