Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0923
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   148   5e-36
AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   145   5e-35
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   145   5e-35
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   145   5e-35

>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  148 bits (359), Expect = 5e-36
 Identities = 89/200 (44%), Positives = 108/200 (54%), Gaps = 2/200 (1%)
 Frame = +1

Query: 16  VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
           VEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIR    
Sbjct: 25  VEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRV 84

Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
                   LS        P    G       +          ++           L ++H
Sbjct: 85  VRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKPYFPRGLSAIH 144

Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*RXEKRXH-*MLSV**HX 549
               F+VR  MR +EFK V TDP P+ IV P+ VI CDG+ I R E+      +      
Sbjct: 145 MGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIG 204

Query: 550 RXSQXXGAI*EMVELPLRYP 609
              +    I EMVELPLR+P
Sbjct: 205 GCRKQLAQIKEMVELPLRHP 224



 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = +3

Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYF 350
           VKY KRV ILPID+S  G+TGNLF  YLKPYF
Sbjct: 105 VKYGKRVRILPIDESTEGVTGNLFEIYLKPYF 136


>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  145 bits (351), Expect = 5e-35
 Identities = 88/200 (44%), Positives = 106/200 (53%), Gaps = 2/200 (1%)
 Frame = +1

Query: 16  VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
           VEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIR    
Sbjct: 25  VEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRV 84

Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
                   LS        P    G       +          ++              +H
Sbjct: 85  VRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIH 144

Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*RXEKRXH-*MLSV**HX 549
               F+VR  MR +EFK V TDP P+ IV P+ VI CDG+ I R E+      +      
Sbjct: 145 MGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIG 204

Query: 550 RXSQXXGAI*EMVELPLRYP 609
              +    I EMVELPLR+P
Sbjct: 205 GCRKQLAQIKEMVELPLRHP 224



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
           VKY KRV ILPID+S  G+TGNLF  YLKPYF+EA
Sbjct: 105 VKYGKRVRILPIDESTEGVTGNLFEIYLKPYFLEA 139


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  145 bits (351), Expect = 5e-35
 Identities = 88/200 (44%), Positives = 106/200 (53%), Gaps = 2/200 (1%)
 Frame = +1

Query: 16  VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
           VEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIR    
Sbjct: 25  VEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRV 84

Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
                   LS        P    G       +          ++              +H
Sbjct: 85  VRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIH 144

Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*RXEKRXH-*MLSV**HX 549
               F+VR  MR +EFK V TDP P+ IV P+ VI CDG+ I R E+      +      
Sbjct: 145 MGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIG 204

Query: 550 RXSQXXGAI*EMVELPLRYP 609
              +    I EMVELPLR+P
Sbjct: 205 GCRKQLAQIKEMVELPLRHP 224



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
           VKY KRV ILPID+S  G+TGNLF  YLKPYF+EA
Sbjct: 105 VKYGKRVRILPIDESTEGVTGNLFEIYLKPYFLEA 139


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  145 bits (351), Expect = 5e-35
 Identities = 88/200 (44%), Positives = 106/200 (53%), Gaps = 2/200 (1%)
 Frame = +1

Query: 16  VEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRXXXX 195
           VEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIR    
Sbjct: 25  VEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMNRV 84

Query: 196 XXXXXXXXLSXXXXXAPXPS*NXGNESTYCQLMIQXXXXXA-IYSXXT*SRTSWRLPSVH 372
                   LS        P    G       +          ++              +H
Sbjct: 85  VRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIH 144

Query: 373 RDXTFMVRXGMRAVEFKXVETDPSPFXIVXPDNVIHCDGEXI*RXEKRXH-*MLSV**HX 549
               F+VR  MR +EFK V TDP P+ IV P+ VI CDG+ I R E+      +      
Sbjct: 145 MGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVGYDDIG 204

Query: 550 RXSQXXGAI*EMVELPLRYP 609
              +    I EMVELPLR+P
Sbjct: 205 GCRKQLAQIKEMVELPLRHP 224



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 255 VKYXKRVHILPIDDSVXGLTGNLFXXYLKPYFMEA 359
           VKY KRV ILPID+S  G+TGNLF  YLKPYF+EA
Sbjct: 105 VKYGKRVRILPIDESTEGVTGNLFEIYLKPYFLEA 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,736,457
Number of Sequences: 53049
Number of extensions: 309932
Number of successful extensions: 449
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)